Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00646 ATGTCCCCGTGCCATGTGATTCTACCCATTGTTCTCTGGGTGTGTACAACAACACTGACCCTGGCTCAGAGCACTCCTCAAGACTTTGTTGAGGTGCACAACCAGGCTCGAGCCGAGCTTGGCGTTGGTCCAATCTCTTGGAACCACACCCTTCAAGCCTATGCTCAAAAGTATGCCAATGAGAGGATCCCTGACTGCAACCTTGAGCACTCTATGGGACCCTATGGCGAGAATCTGGCAGAAGGGTACGGCGAAATGAAGGGTTCTGATGCTGTCAAGTTCTGGCTCACTGAGAAGCCTTGCTATGACTACAAATCCAATTCTTGTGTTCATGATGAGTGCGGCCATTATACTCAGATTGTGTGGCGCAATTCTGTTCATCTAGGGTGTGCCAGAGCCAAGTGTAACAATGGTTGGATGTTTGTCATTTGCAGCTATTCTCCACCAGGGAACATCGAAGGAGAACGACCTTATTGA 477 0.4927 MSPCHVILPIVLWVCTTTLTLAQSTPQDFVEVHNQARAELGVGPISWNHTLQAYAQKYANERIPDCNLEHSMGPYGENLAEGYGEMKGSDAVKFWLTEKPCYDYKSNSCVHDECGHYTQIVWRNSVHLGCARAKCNNGWMFVICSYSPPGNIEGERPY 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00646 158 Gene3D CAP 24 158 IPR035940 -
Spst6g00646 158 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 27 155 IPR001283 -
Spst6g00646 158 PRINTS Allergen V5/Tpx-1 family signature 91 104 IPR001283 -
Spst6g00646 158 PRINTS Allergen V5/Tpx-1 family signature 114 130 IPR001283 -
Spst6g00646 158 PRINTS Allergen V5/Tpx-1 family signature 45 63 IPR001283 -
Spst6g00646 158 PRINTS Allergen V5/Tpx-1 family signature 141 154 IPR001283 -
Spst6g00646 158 CDD CAP_PR-1 26 158 - -
Spst6g00646 158 ProSitePatterns CRISP family signature 2. 141 152 IPR018244 GO:0005576
Spst6g00646 158 Pfam Cysteine-rich secretory protein family 31 146 IPR014044 -
Spst6g00646 158 SMART SCP_3 24 154 IPR014044 -
Spst6g00646 158 FunFam Putative pathogenesis-related protein 1 23 158 - -
Spst6g00646 158 SUPERFAMILY PR-1-like 23 158 IPR035940 -
Spst6g00646 158 ProSitePatterns CRISP family signature 1. 115 125 IPR018244 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00646 Spst-Chr6 5852372 5852848 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00646 K13449 - gmx:100527778 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00646 6 5852372 5852848 Spst6g00646 6 5852372 5852848 ECH
Spst3g00468 3 7871299 7871775 Spst6g00646 6 5852372 5852848 PCT