Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00468 ATGAAGTCCTCAAGTCTGGCGTTCATCCTAACCATTGTGTCAACGTGCAGCATTTTCTTAGCAGCAAGAAGCTCCCCGGAAGATTTCCTTGAAGTGCACAACGAAGCTCGCGCAGCGGTTGGTGTAAAACCATTGAAATGGAACGAAACCCTGGTAGCCTATGCTCAGAAATATGCGGACTCGAAGAAACAGACGTGCGAAATGGAGCATTCAATGGGGCCTTACGGGGAGAACCTGGCGGAGGGTTATGAGGAATTGAAGGGCTCGGACGCAGCGAAAATGTGGCTGTCGGAGAAATCCTTTTATGACCCGGAGACGAAACAGTGTGTTAAAGACGAGTGCTTGCATTATACTCAGATGGTTTGGAACACCACAGAGAGTATTGGATGTGCTCGGACCAAGTGTGACAATGGCTGGATGTTTGTCATCTGCAGTTATTACCCTCCAGGCAATTACGTAGGCTCTGCACCTTACTAA 477 0.4864 MKSSSLAFILTIVSTCSIFLAARSSPEDFLEVHNEARAAVGVKPLKWNETLVAYAQKYADSKKQTCEMEHSMGPYGENLAEGYEELKGSDAAKMWLSEKSFYDPETKQCVKDECLHYTQMVWNTTESIGCARTKCDNGWMFVICSYYPPGNYVGSAPY 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00468 158 Gene3D CAP 24 158 IPR035940 -
Spst3g00468 158 PRINTS Allergen V5/Tpx-1 family signature 91 104 IPR001283 -
Spst3g00468 158 PRINTS Allergen V5/Tpx-1 family signature 141 154 IPR001283 -
Spst3g00468 158 PRINTS Allergen V5/Tpx-1 family signature 45 63 IPR001283 -
Spst3g00468 158 PRINTS Allergen V5/Tpx-1 family signature 114 130 IPR001283 -
Spst3g00468 158 CDD CAP_PR-1 26 158 - -
Spst3g00468 158 FunFam Putative pathogenesis-related protein 1 23 158 - -
Spst3g00468 158 ProSitePatterns CRISP family signature 2. 141 152 IPR018244 GO:0005576
Spst3g00468 158 SMART SCP_3 24 154 IPR014044 -
Spst3g00468 158 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 28 155 IPR001283 -
Spst3g00468 158 Pfam Cysteine-rich secretory protein family 30 146 IPR014044 -
Spst3g00468 158 SUPERFAMILY PR-1-like 27 158 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00468 Spst-Chr3 7871299 7871775 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00468 K13449 - gmx:100527778 206.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00468 3 7871299 7871775 Spst3g00468 3 7871299 7871775 ECH
Spst3g00468 3 7871299 7871775 Spst6g00646 6 5852372 5852848 PCT