Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00644 ATGGCGGTGGAGTATGAGTGCTGTGAAACTCAGTTTTTCATTCGGTTACTGATAATTGTGCTCCTTGTGTTGTTTGCTGGATTGATGTCAGGGCTCACTTTAGGACTCATGTCCTTGAGTCTTGTCGATCTTGAGGTTCTTGCTAAATCTGGCACCCCTCAGGATCGCAAACATGCTGCGAAGATATTGCCTGTTGTCAGAAATCAACATTTGTTGCTTTGCACCCTTCTAATTTGCAACGCTGCAGCCATGGAGGCACTTCCTATCTTTCTCGATAGTCTTGTTGTTGCATGGGGTGCTATCCTGATTTCTGTAACATTAATTCTCCTGTTTGGTGAGATTATACCACAATCAATTTGTTCTCGGTATGGTTTAGCAATTGGTGCAACTGTGGCCCCAGTTGTCCGTGTTCTTGTATGGATATGTTTTCCTGTTGCCTATCCAATTAGCAAGTTGTTGGACTATTTGCTGGGGCATCGACATGAAGCACTTTTCCGCAGAGCTGAGTTGAAAACACTTGTAAATCTGCATGGAAATGAGGCTGGAAAAGGTGGAGAACTGACACATGATGAAACAACAATCATTGCTGGAGCACTTGAACTCACTGAGAAGACAGCCAGTGATGCCATGACTCCCATAACTGAAATATTTTCTATTGATATTAATTCAAAGCTCGATAGGGAATTGATGAATCTAATATTGGAGAAAGGGCATAGCAGAGTCCCTGTCTACTACGAGGAGCGTACAAATATTGTTGGACTTATCTTGGTCAAGAATTTACTGACAATTGACCCAGAAGAAGAGGTACCCGTGAAAAGTGTGACCATACGGAGAATCCCAAGGGTTCCAGAAACGATGCCACTGTATGATATTTTGAATGAGTTCCAGAAGGGCCATAGCCACATGGCTGTTGTTGTCAGACATTCTGACAAGACAGGCCAACAGTCTTCCATCAATAATAATGACAATGTGAGAGATGTGAAGGTAGATATTGATGGGGAGAAGACTCCCCGAGAGAATAATAAGTTGAAAACCAAGAGGTCACTCCAAAAGTGGAAGAGCTTTCCAAACTCAAATAATTCCAACAGGGGTAGTTCCAGGTGCAGAAAATGGTCAAAAAATATGTACTCAGATATTCTGGAAATAGATGAAAATACACTTCCAACACTGCCAGAAAAAGAAGAAGCTGTTGGAATTATTACAATGGAAGATGTCATTGAAGAGCTTTTACAGGAGGAGATCTTTGATGAGACTGATCATCACTTTGAAGACTCATGA 1278 0.4178 MAVEYECCETQFFIRLLIIVLLVLFAGLMSGLTLGLMSLSLVDLEVLAKSGTPQDRKHAAKILPVVRNQHLLLCTLLICNAAAMEALPIFLDSLVVAWGAILISVTLILLFGEIIPQSICSRYGLAIGATVAPVVRVLVWICFPVAYPISKLLDYLLGHRHEALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPITEIFSIDINSKLDRELMNLILEKGHSRVPVYYEERTNIVGLILVKNLLTIDPEEEVPVKSVTIRRIPRVPETMPLYDILNEFQKGHSHMAVVVRHSDKTGQQSSINNNDNVRDVKVDIDGEKTPRENNKLKTKRSLQKWKSFPNSNNSNRGSSRCRKWSKNMYSDILEIDENTLPTLPEKEEAVGIITMEDVIEELLQEEIFDETDHHFEDS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00644 425 Gene3D - 191 325 IPR046342 -
Spst6g00644 425 Pfam Cyclin M transmembrane N-terminal domain 17 190 IPR002550 -
Spst6g00644 425 SUPERFAMILY CBS-domain pair 194 411 IPR046342 -
Spst6g00644 425 Pfam CBS domain 227 262 IPR000644 -
Spst6g00644 425 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Spst6g00644 425 Gene3D - 345 417 IPR046342 -
Spst6g00644 425 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Spst6g00644 425 PANTHER METAL TRANSPORTER CNNM 3 422 IPR045095 GO:0010960
Spst6g00644 425 FunFam DUF21 domain-containing protein 189 324 - -
Spst6g00644 425 ProSiteProfiles CBS domain profile. 210 271 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00644 Spst-Chr6 5834199 5837813 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00644 K16302 - gmx:100795897 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00644 6 5834199 5837813 Spst6g00644 6 5834199 5837813 ECH
Spst3g00462 3 7737247 7742374 Spst6g00644 6 5834199 5837813 PCT