Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00462 ATGGCGGTGGAGTACACATGCTGCACATCGGAGTTCTTCATCCACATACTCCTCATCGTGTTGCTCGTGCTGTTCGCGGGCCTCATGTCGGGCCTCACCTTGGGCCTCATGTCCCTCAGCCTTGTTGATCTCGAGGTCCTCGCTAAGTCTGGTACTCCTCAAGATCGTAAGCACGCTGCGAAGATATTACCAGTTGTCAAAAACCAACATTTATTGCTTTGTACTCTGCTAATTTGCAATGCTGCAGCCATGGAGGCCCTTCCTATTTTTCTCGATAGTCTTGTTACTGCGTGGGGTGCTATCCTTATTTCGGTGACATTAATTCTTTTGTTCGGTGAGATTATACCCCAATCAGTTTGTTCTCGGTATGGTTTGGCTATTGGTGCATCAGTGGCTCCCTTTGTTCGGGTTCTTGTATGCATATGCTTTCCTGTTGCCTTTCCAATTAGTAAGTTGTTGGACTTTTTGCTTGGCCATCGACATGAAGCCTTATTCCGTAGAGCTGAATTAAAGACACTTGTAGATTTGCATGGTAATGAGGCTGGAAAAGGTGGGGAACTGACACATGATGAAACGACTATCATTGCTGGGGCACTTGAACTCAGCGAGAAGACAGCCAGTGATGCCATGACTCCTATAGCTGAAACATTTGCCGTTGATATTAATTCAAAGCTTGATAGGGAACTGATGAATGAAATATTGGAGAAAGGGCATAGCAGAGTCCCAGTCTTTTATGAGCAGCCTACAAACATTATAGGACTTATACTGGTGAAGAATTTGTTGACTGTTCATCCAGAAGATGAAGCACCCGTAAAGAGTGTAACTATACGCAGGATTCCAAGGGTACCAGAAAGTATGCCACTTTATGACATTTTGAATGAGTTCCAGAAGGGCCATAGTCACATGGCAGTTGTTGTGAGACGGTGTGACAAGTTGAAGCAACAATCTCCCCAAAATAATGCAAACGACTCGGTGAGAGATGTGAAGGTGGATATTGATGGTGAAAAGTCTCCCAAAGAGAAAGCTTTGAAATCCAAGGTGCCACTCCATAAGTGGAAAAGCTTCCCAAATACAAACATGTCAAATAGGGGTGGTTCTCGAAGCAGAAAATGGTCAAAAAATATGTACTCGGATATTTTGGAGATAGATGGAAGTCCCCTTCCAAAGCTCCCTGAAGAAGAAGAAGCTGTTGGCATTATTACAATGGAAGATGTCATTGAAGAGCTTCTACAGGAGGAGATTTTTGATGAGACAGATCATCATTTTGAAGACTCATGA 1278 0.4374 MAVEYTCCTSEFFIHILLIVLLVLFAGLMSGLTLGLMSLSLVDLEVLAKSGTPQDRKHAAKILPVVKNQHLLLCTLLICNAAAMEALPIFLDSLVTAWGAILISVTLILLFGEIIPQSVCSRYGLAIGASVAPFVRVLVCICFPVAFPISKLLDFLLGHRHEALFRRAELKTLVDLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTPIAETFAVDINSKLDRELMNEILEKGHSRVPVFYEQPTNIIGLILVKNLLTVHPEDEAPVKSVTIRRIPRVPESMPLYDILNEFQKGHSHMAVVVRRCDKLKQQSPQNNANDSVRDVKVDIDGEKSPKEKALKSKVPLHKWKSFPNTNMSNRGGSRSRKWSKNMYSDILEIDGSPLPKLPEEEEAVGIITMEDVIEELLQEEIFDETDHHFEDS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00462 425 FunFam DUF21 domain-containing protein 189 324 - -
Spst3g00462 425 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Spst3g00462 425 Pfam Cyclin M transmembrane N-terminal domain 17 190 IPR002550 -
Spst3g00462 425 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Spst3g00462 425 Gene3D - 191 325 IPR046342 -
Spst3g00462 425 Gene3D - 381 417 IPR046342 -
Spst3g00462 425 PANTHER METAL TRANSPORTER CNNM 3 422 IPR045095 GO:0010960
Spst3g00462 425 SUPERFAMILY CBS-domain pair 194 411 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00462 Spst-Chr3 7737247 7742374 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00462 K16302 - gmx:100801937 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00462 3 7737247 7742374 Spst3g00462 3 7737247 7742374 ECH
Spst3g00462 3 7737247 7742374 Spst6g00644 6 5834199 5837813 PCT