Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00602 ATGGCGGAGAAGACGGAGAAGGTGAAGGGTGAGGCGGTGCAGATAATTGAAGGGTTCGAGGTTCTGCCAAAGCTCGTGGTTTTTGATCTCGATTACACTCTCTGGCCTTTCTACTGTGAGTGTCGATCAAAGTGGGAAATGCCCTCTCTATATCCTCACGCCAAAGGCATATTGTTTGCGCTCAAAGAGAAAGGCATTGACGTTGCAATAGCTTCTCGCTCACCAACCTCTGACATTGCAACAGCTTTCCTCAACAAATTAGGTCTCTCCTCATTCTTCGTCGCACAGGAAATATATTCCAGTTGGACCCATAAAACGGATCATTTTCAGAGAATTCATTCCAGGACTGGTGTCCCCTTGAACTCCATGCTCTTTTTTGACGATGAGAATAGGAACATCCAATCGGTATCTAAAATGGGAGTAACTAGCATTTTGGTGGGAGATGGGGTAAATCTTGGGTCCTTGAGGGAAGGTCTTACTCAATTCTCTCGAAACTGGAATGCGGCGCAAAAGAACAAGCAGAAATGGCTTTCCAATTACTCTAACAAGCCAGATACTTCCAACCCTGCTGCATGA 576 0.4566 MAEKTEKVKGEAVQIIEGFEVLPKLVVFDLDYTLWPFYCECRSKWEMPSLYPHAKGILFALKEKGIDVAIASRSPTSDIATAFLNKLGLSSFFVAQEIYSSWTHKTDHFQRIHSRTGVPLNSMLFFDDENRNIQSVSKMGVTSILVGDGVNLGSLREGLTQFSRNWNAAQKNKQKWLSNYSNKPDTSNPAA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00602 191 NCBIfam HAD-IIIC family phosphatase 24 139 IPR010033 -
Spst6g00602 191 SFLD C1.5.2: MDP Like 5 170 - -
Spst6g00602 191 Gene3D - 5 168 IPR023214 -
Spst6g00602 191 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1 5 172 IPR010036 GO:0016791
Spst6g00602 191 CDD HAD_MDP-1_like 23 146 IPR035679 -
Spst6g00602 191 SUPERFAMILY HAD-like 23 157 IPR036412 -
Spst6g00602 191 FunFam Magnesium-dependent phosphatase 1 8 168 - -
Spst6g00602 191 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 5 170 - -
Spst6g00602 191 Pfam Acid Phosphatase 22 164 IPR010036 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00602 Spst-Chr6 5430550 5431387 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00602 K17619 - gmx:100305763 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00411 3 7211246 7213407 Spst6g00602 6 5430550 5431387 PCT