Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00411 ATGGAGGACGTGGAGCGGGTGAAGGCCGAGGCACTGCAAGTCATGGGACTGTTTCAAGTGCTCCCGAGGCTGGTCGTCTTCGACCTCGATTACACTCTTTGGCCTTTCTACTGTGAGTGTCCATCGAAGAACGACACGCCTTCTTTGTTTCCTCATTCCAGAGGTATTTTGCACGCACTCAAACACCAGAGGATTGATGTTGCAATTGCTTCTAAGTCACCAACTCCTGACATTGCAACCACGTATCTTCACAAACTCAGCATCAGGTCAATGTTTGTCGCCGAGGAAATATTTTACAGCTGGACACACAAGACAGATCATTTTCAAAAAATTCTTTCAAAGACTGGGGTCCCCTATAACTCCATGCTATTCTTTGACGATGATGATAATAACATCCAACAGATCTCAAAAATTGGAGTAACAAGTATTTTGGTTAGAAATGGGCTAGATCTTGAAGCATTTAGAAACGGCCTTGCAAAATTTTCTCAAAACGGGAATCGATCGAAGAAGAACAAGCAGAAAAGGCCCAATTAA 534 0.4363 MEDVERVKAEALQVMGLFQVLPRLVVFDLDYTLWPFYCECPSKNDTPSLFPHSRGILHALKHQRIDVAIASKSPTPDIATTYLHKLSIRSMFVAEEIFYSWTHKTDHFQKILSKTGVPYNSMLFFDDDDNNIQQISKIGVTSILVRNGLDLEAFRNGLAKFSQNGNRSKKNKQKRPN 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00411 177 NCBIfam HAD-IIIC family phosphatase 24 138 IPR010033 -
Spst3g00411 177 SUPERFAMILY HAD-like 23 152 IPR036412 -
Spst3g00411 177 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 5 169 - -
Spst3g00411 177 SFLD C1.5.2: MDP Like 5 169 - -
Spst3g00411 177 Pfam Acid Phosphatase 21 163 IPR010036 GO:0016791
Spst3g00411 177 Gene3D - 6 167 IPR023214 -
Spst3g00411 177 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1 1 171 IPR010036 GO:0016791
Spst3g00411 177 FunFam Magnesium-dependent phosphatase 1 7 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00411 Spst-Chr3 7211246 7213407 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00411 K17619 - gmx:100795199 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00411 3 7211246 7213407 Spst3g00411 3 7211246 7213407 ECH
Spst3g00411 3 7211246 7213407 Spst6g00602 6 5430550 5431387 PCT