Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00583 ATGTCTTCAGCCAGTCTTTCTACTCTGAGCGTGGTTCCCTCTGAGCCATTGTTGTCACCAAAGGCATTCCCTTTCCCATCACACTTGTCTTTGGAAGATAAATCCATTTTCGTATATCTCTCCTTTTCGGGTTCATTGACTCCAGTCCGTGTTATGGAGTGGGATACCATTGAGTCTGTGAAATTCAAAATCCAAAGTGATTCTCTGCTGAAGGACTATGGAGTAACCGGTGGAAATGTTTTGCATTTGATAATCAAACTGTCGGATCTTCAGGTCATCAATGTGAAAACTTCTTGTGGGAAGGAGTTCACGTTTCAGGTTGAAAGAGGTCGGGATGTTGGGTACGTAAAACGGCGGATTGCCAAAAGAGAGAAACAGTTTGATGATCCCGAGGAGCAGGAGCTTGTGTGCAACGGGGAAAGGCTTGATGACGGGAGGCTTATTGATGATATCTGCTGCAAGCATAATGATGCTGTGGTACATCTGTTCATGAGAAAAAAGCATGTTAAAGTTCAGAGGGGACCCCTTGAGTTGTCCATTGTAGCAACAGATTTGATTGATAAGAAAAAAAATGATGTCAATGGAAGGACATGTAGGAGAAATTATGATGTTGGTAAAGAAGATACTGTCAGAGAGTCTGGTGCCACTCAAAGAACTGTGCCGAGAAAGCCTCCTGACAGAGGTTTTATTTTGGAGCCAGTTATTATTAACCCTAAAATTGAATGTGCTCCAGCTATATGGAATATGGTGAACTCTACATATGATGGGCTTGACAGTGGAAAATATCCAATCAGATCTGCAGAGGGTAGTGGAGGAGCTTACTTTATGCTTGATTCAGCGGGGCAAAAGTATATGTCCGTTTTCAAGCCTATTGATGAAGAGCCAATGGCTGTGAATAACCCTCGTGGCCTTCCGTTGTCGTTAAATGGTGAAGGCTTAAAAAAGGGTACAAGAGTTGGTCAAGGTGCATTCAGGGAAGTTGCAGCCTATGTTCTAGATCATCCATTGAGTAGGCGGCGCAAATTATTTGGTGATGAGAGGGGCTTTGCAGGTGTTCCTCCAACGTTGATGGTTAAATGCTTGCATAAAGCATTTAACTATCCTAAAGAATTGATTCCTAAGATTGGCTCCTTGCAAATGTTCATAGAAAATAATGGAAGCTGTGAAGATATGGGCCCTGGGGCTTTCCCAGTAAAGGAGGTACATAAAATTACTGTTTTGGACATAAGACTGGCAAATGCAGATAGGCATGCTGGGAATATTTTGATCAGGAAAGAGGAAGACAACAACCAGTCTGTTCTGATTCCAATTGATCACGGATACTGCTTGCCTACGACCTTTGAAGATTGTACCTTTGAGTGGCTTTACTGGCCCCAAGCTCGCCAGCCATACTCCCCAGAATCTATTGAGTACATAAAGTCACTGGATGCTGAAGAAGATATTACCCTTTTGAAGTTTCATGGATGGGATCTGCCAGTTGAATGTGCTCGCACTCTTAGGATCTCAACCATGCTTTTGAAGAAAGGGGTAGAGAGAGGGTTGACTCCCTTTGCCATTGGAAGCATGATGTGCAGGGAATCCTTGAACAAGGAATCTGTGATTGAAGAAATAGTACAAGCAGCTCTGGATTCTGTTCTTCCTGGCACAAGTGAAGTTACATTGCTGGATGCTGTTTCCCAAATCATGGATCTGCACCTCGATGAGATTGTCAGATCTCGTTTATAA 1725 0.4313 MSSASLSTLSVVPSEPLLSPKAFPFPSHLSLEDKSIFVYLSFSGSLTPVRVMEWDTIESVKFKIQSDSLLKDYGVTGGNVLHLIIKLSDLQVINVKTSCGKEFTFQVERGRDVGYVKRRIAKREKQFDDPEEQELVCNGERLDDGRLIDDICCKHNDAVVHLFMRKKHVKVQRGPLELSIVATDLIDKKKNDVNGRTCRRNYDVGKEDTVRESGATQRTVPRKPPDRGFILEPVIINPKIECAPAIWNMVNSTYDGLDSGKYPIRSAEGSGGAYFMLDSAGQKYMSVFKPIDEEPMAVNNPRGLPLSLNGEGLKKGTRVGQGAFREVAAYVLDHPLSRRRKLFGDERGFAGVPPTLMVKCLHKAFNYPKELIPKIGSLQMFIENNGSCEDMGPGAFPVKEVHKITVLDIRLANADRHAGNILIRKEEDNNQSVLIPIDHGYCLPTTFEDCTFEWLYWPQARQPYSPESIEYIKSLDAEEDITLLKFHGWDLPVECARTLRISTMLLKKGVERGLTPFAIGSMMCRESLNKESVIEEIVQAALDSVLPGTSEVTLLDAVSQIMDLHLDEIVRSRL 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00583 574 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 260 553 IPR000403 -
Spst6g00583 574 ProSiteProfiles Ubiquitin domain profile. 93 150 IPR000626 GO:0005515
Spst6g00583 574 CDD Ubl_ubiquitin_like 93 163 - -
Spst6g00583 574 Pfam Ubiquitin family 93 166 IPR000626 GO:0005515
Spst6g00583 574 Gene3D - 91 168 - -
Spst6g00583 574 SUPERFAMILY Protein kinase-like (PK-like) 409 569 IPR011009 -
Spst6g00583 574 SUPERFAMILY Ubiquitin-like 67 166 IPR029071 -
Spst6g00583 574 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 45 543 IPR044571 -
Spst6g00583 574 Pfam Phosphatidylinositol 3- and 4-kinase 269 518 IPR000403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00583 Spst-Chr6 5296225 5298157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00583 33 568 Acyl Lipid Metabolism Gene Families AT5G24240 53.369 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00583 - - gmx:100791631 1042.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00583 6 5296225 5298157 Spst4g01973 4 60389969 60392398 PCT