Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00580 ATGGAGTGGTCTGCAAGATGTGCTACCATGGCTTACCTTGATGCCCTTCAGCTGAATACATTGAGCAGGAAGCATCGCCGGAATAAATCAAATAAACACACATCAAAGAAGTGCTTCAATGCCATATCAAGAATTGGATTGCAACAGCAGGGAAACAATGAATTTGTATCAGCATTAGCAGCTGGTATGAAAGCAAAACTTATAGTAGAAGTGACACATCGAGCATCTCCATCAACAATAGCCCTGGCAGCAGCTGCAAGACAAACTGGTGGAAGGTTGGTGTGTATTCTCCCGGAACTGGTCCTTAACGAGTCTGAAGAAGTTATTAGGAACTCGGGTCTAAAGGAACAAGTAGAATTTAGAACTGAAGATCCATCAAAGATATTGCCATATTATGAAAATATTGGTTTCTCTTTCGTTGATTGCAAAGTTGAAAACTCTGCAAGGTTGCTCAACTTGCTACATCTCAACCCTATGAGATCTGTAGTGGTGGCAAGCAATTTGGTTGGGAATACAGAAGGGTTGGGAGGCTATGTAAAAAGAAAGGATGAGAAAGTAGCGGTGAGATCTCTAAAGCACCCTATAGGTAAAAAGGTATTTTTTGCACGAATGATGAAAATGATAAGAGGGCTGGGGTCAGAGACAATAGTAGCAGAAAAATCAAAAAAGGTTGTCTTTGTTGTCAAAGAGCTTAACATGCTGCGGATGGGAATAATCAAGTGCATGCTTGGTGTTGATTAG 741 0.4103 MEWSARCATMAYLDALQLNTLSRKHRRNKSNKHTSKKCFNAISRIGLQQQGNNEFVSALAAGMKAKLIVEVTHRASPSTIALAAAARQTGGRLVCILPELVLNESEEVIRNSGLKEQVEFRTEDPSKILPYYENIGFSFVDCKVENSARLLNLLHLNPMRSVVVASNLVGNTEGLGGYVKRKDEKVAVRSLKHPIGKKVFFARMMKMIRGLGSETIVAEKSKKVVFVVKELNMLRMGIIKCMLGVD 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00580 246 PANTHER PUTATIVE (AFU_ORTHOLOGUE AFUA_6G01830)-RELATED 1 204 - -
Spst6g00580 246 Pfam Protein of unknown function (DUF1442) 47 203 IPR009902 -
Spst6g00580 246 Gene3D Vaccinia Virus protein VP39 21 197 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00580 Spst-Chr6 5273643 5274912 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00580 - - qsa:O6P43_017780 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00580 6 5273643 5274912 Spst4g01971 4 60370477 60371520 PCT