Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01971 ATGGAGTGGTCTTCAAAATCTGCTTCAAGGGCCTATCTTGATACCCTTCAACTGTGTGAGAATAAAAAAAGACAATATGGAAATTGGAGAGTTCAAAATCCGGGAAGCAATGAATTTGTATCAGCATTAGCAGCAGGAATGAAAGCCAAAGTTATGGTAGAAGTGACATATTGTGTGTCCCTGTACACAATTGCTCTAGCAGTTGCTGCAAGACAAACAGGTGGCAGAATGGTGTGTATGATTCCCGAGTCACTCCTTGATGAGTCAAAAGAAGTTATCATCAACTCAGGGCTTGAAGACCAAGTAGAATTTAGAACTGAAGACCCCTCAAAGCTATTATCCTATTATGAGAACATTGATTTTTTTCTAGTTGATTGCAAGGATGAGAACTACACAAACTTGCTCAAACTGGTTGATCTTAATCTCAAAAGATCAATAGTGGTGGCCAAAAATATGCTATGTGATAAAAAAGGATTAAGATGGCATCTAAGAGAAAAATACGAGAGATTAGAAGTAAGATATATAAACCATCCTTTAGGGAATGACATGGGAGTTACATGCATTTGCATGAATGATGACAGAAATAAGAGAAGTGGGGTTAAAGTAGATTGTGGGAAGAAAAGAAGAAAGAGTTCATGGATTGCCAAATTTGATGAGGAGAGTGGTGAGGAACATATTTATAGGGTACCTCAGGTTGATTAG 702 0.3775 MEWSSKSASRAYLDTLQLCENKKRQYGNWRVQNPGSNEFVSALAAGMKAKVMVEVTYCVSLYTIALAVAARQTGGRMVCMIPESLLDESKEVIINSGLEDQVEFRTEDPSKLLSYYENIDFFLVDCKDENYTNLLKLVDLNLKRSIVVAKNMLCDKKGLRWHLREKYERLEVRYINHPLGNDMGVTCICMNDDRNKRSGVKVDCGKKRRKSSWIAKFDEESGEEHIYRVPQVD 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01971 233 Gene3D Vaccinia Virus protein VP39 4 191 IPR029063 -
Spst4g01971 233 Pfam Protein of unknown function (DUF1442) 3 228 IPR009902 -
Spst4g01971 233 PANTHER DUF1442 FAMILY PROTEIN 1 228 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01971 Spst-Chr4 60370477 60371520 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01971 - - gmx:102660803 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01971 4 60370477 60371520 Spst4g01971 4 60370477 60371520 ECH
Spst6g00580 6 5273643 5274912 Spst4g01971 4 60370477 60371520 PCT