Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00578 ATGGCAAAGCTAAGATCTTGGACTCTGAGATGGCCTTCTATTGTCCGAGTGTGTATTCTGAATTTTGTTTTGAACTTCATGATCGTAACATTAGCTGATGACACTGGAAGTAACAGTATTGTATCAGAAGGTGACTGCAAGAGCACAAATTATCAGATTTTCCTCCCTTCACCGTATCAGAATATATCCTCTACCATATGCAAACCTGTTTGGAATTCATACGAATTGAGGTACACCAAGACGGGTGATACAACAACTATCATATTATCTGCTCCCTACACTGTTGGGTGGGTAGGAATTGGATTTTCTAGGGATGGCATGATGGCTGGTTCCAGTGCAATGGTAGGATGGATTAACAAACATGGTCATACAAAAGTCAAACAATTTTATCTACGGGGTCGGAGGCAATCAGAAGTAATTGTAGACAAAGGGGAACTGCCTCTAAATAATGTACCAGCTGCAGTGGCAACAAATGGAGCTGAAATCTATATAGCGTTTCAGCTACAAACGACAATTCCATTCGGGAAGCAACCGATTTTATTAGCTTTCAGTACTAAACGTCCACTGAACCACCATCTACCAAAACATGTTGACAAAATAGCAGTTATATTTGATTTTTCTTCAGGTTCTGCGGGCCCGGTATCCAATGGGTTGATTCAGATGAGAAAGAACCATGGAATAGTGGGTATAGTAGGGTGGGGCCTAATCCTGCCTGTGGGGGCAATTATTGCTAGGTACTTCAGGCATAAGGATCCCCTGTGGTTCTATCTCCATTCAGCCATTCAATTTGTGGGATTTGCATTTGGGCTTGCCACAGTCCTTCTTGGCTTACAACTCTACAGAAATGTGCATGTCCACATACCAGCTCACAGAGGCATAGGCATCTTTGTCCTTGTCCTAAGTATTCTTCAGATATTGGCATTTTTCTTGAGGCCAGACAAGGATTCCAAGTTCCGAAACATTTGGAATTTGTATCACAGTTGGCTTGGAAGAATGGCACTTTTCTTTGCAGCTTTGAATATAGTGTTGGGGATGCGAGCTGCAGGGGCAGGGAATGATTGGAAGATAGGCTATGGATTCCTTATTAGCATTATACTTGTGGCAGTTATCGTTCTCGAAGTACTGGCGTATTTGAAAAGGTCACAAAAGCGTTCTCTTCCTCACACTTTCCAAATGGACTCAGTTGGAGAAGCTACCTTTCCGACCAATCTAGCAAAAGGTATGAACGCTTTTACTTTGTTTCATACTACTCCATTTGTTTATTGA 1266 0.4202 MAKLRSWTLRWPSIVRVCILNFVLNFMIVTLADDTGSNSIVSEGDCKSTNYQIFLPSPYQNISSTICKPVWNSYELRYTKTGDTTTIILSAPYTVGWVGIGFSRDGMMAGSSAMVGWINKHGHTKVKQFYLRGRRQSEVIVDKGELPLNNVPAAVATNGAEIYIAFQLQTTIPFGKQPILLAFSTKRPLNHHLPKHVDKIAVIFDFSSGSAGPVSNGLIQMRKNHGIVGIVGWGLILPVGAIIARYFRHKDPLWFYLHSAIQFVGFAFGLATVLLGLQLYRNVHVHIPAHRGIGIFVLVLSILQILAFFLRPDKDSKFRNIWNLYHSWLGRMALFFAALNIVLGMRAAGAGNDWKIGYGFLISIILVAVIVLEVLAYLKRSQKRSLPHTFQMDSVGEATFPTNLAKGMNAFTLFHTTPFVY 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00578 421 SMART 561_7 224 345 IPR006593 -
Spst6g00578 421 SUPERFAMILY CBD9-like 76 124 - -
Spst6g00578 421 SMART DOMON_3 97 184 IPR005018 -
Spst6g00578 421 CDD DOMON_DOH 71 139 IPR045266 -
Spst6g00578 421 ProSiteProfiles Cytochrome b561 domain profile. 189 381 IPR006593 -
Spst6g00578 421 Pfam DOMON domain 76 143 - -
Spst6g00578 421 Gene3D - 200 386 - -
Spst6g00578 421 ProSiteProfiles DOMON domain profile. 72 186 IPR005018 -
Spst6g00578 421 CDD Cyt_b561_FRRS1_like 204 374 - -
Spst6g00578 421 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 26 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00578 Spst-Chr6 5264407 5266762 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00578 - - gmx:100792152 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00578 6 5264407 5266762 Spst4g01970 4 60366612 60368701 PCT