Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01970 ATGGCAAATAGTAGATCTTGGACTCAGATATGGCCATCTTTTGTCAGGCTATGTGTTCTGATTTTTATCTTGCATTTCAACACAGCATTGGCTGATGACAGTGGAAGTGGTGGTGTTGCAGCCTGCAAGAACACAAATTATCAAAGTTTCCTCCCTCCACCGTACCAGAATATATCCCACATGATATGCTCACCTGTATGGCATACATTTGAATTGAGGTACATCAAGAATGGTGATACCACAACTATCATACTATCTGCTCCCTACACTATAGGGTGGATAGGAATTGGATTTTCTAAAGATGGTATGATGGTTGGTTCCAGTGCAATGGTGGGATGGATTAGTAAACATGGTCATGCAAAAATCAAGCAATTTTACTTACAGGGTAGGAGGCCATCAGAAGTCATAATAGACAAAGGAGAACTCCCCCTCAATAATGTCCCTGCGGCTGTGGCAATTAATGGGGCTGAAATTCATTTGGCATTTCAGTTGCAGATGACAACCCCATTTCAGAAACAGCCAATTCTGTTGGCTTTTGGTAGTAAATATCCACAGAACCACCATCTCTCCAAGCATCAAGACAAAACAACCATTGTTTTTGATTTTTCTGCAGGTTCTACGGGTCCTGTATCCCATGAATTGATTCAGATGAGGACGAAACATGGAATTTTGGGCATAATAGGGTGGGGTCTAATCCTTCCTGTAGGGGCAATTATTGCTAGATATTTCAGGCACAAGGATCCCTTATGGTTCTACCTCCATGCAATAATTCAGTTTGTGGGATTTACATTTGGGCTTACTACAGTCGTTCTTGGATTACAACTCTATTCCAAAATGCATGCCCATATACAAGCTCACAGAGGCATAGGTATCTTTGTCCTCGTACTGACTATTCTTCAGATATTTGCATTAATCTTGAGACCAAACAAGGATTCCAAGATCCGAAAAATGTGGAATTGTTACCACAGCTGGTTTGGAAGGTTGGCACTCATATTTGCAGCCATTAACATAGTTTTGGGGATGAAAGCTGCCGGGGCAGGAAGTGATTGGAAAATAGGCTATGGGTTCCTTTTTGGTATAGTGGTTGCTGCAGCTATTGTTCTTGAAGCATTGGCTTATCTGAAAAGATCAGAGATGCGTTCTCTACCTCCTAACTTCCAAATAGACCCTGTTGGAGGAGCTACATTTCCAAGTAATCAAGCCCTTTCTTTTCTTCTTCTTCCCTCGTTTTATGTAATCTCTCTCTAG 1248 0.4151 MANSRSWTQIWPSFVRLCVLIFILHFNTALADDSGSGGVAACKNTNYQSFLPPPYQNISHMICSPVWHTFELRYIKNGDTTTIILSAPYTIGWIGIGFSKDGMMVGSSAMVGWISKHGHAKIKQFYLQGRRPSEVIIDKGELPLNNVPAAVAINGAEIHLAFQLQMTTPFQKQPILLAFGSKYPQNHHLSKHQDKTTIVFDFSAGSTGPVSHELIQMRTKHGILGIIGWGLILPVGAIIARYFRHKDPLWFYLHAIIQFVGFTFGLTTVVLGLQLYSKMHAHIQAHRGIGIFVLVLTILQIFALILRPNKDSKIRKMWNCYHSWFGRLALIFAAINIVLGMKAAGAGSDWKIGYGFLFGIVVAAAIVLEALAYLKRSEMRSLPPNFQIDPVGGATFPSNQALSFLLLPSFYVISL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01970 415 CDD DOMON_DOH 69 197 IPR045266 -
Spst4g01970 415 SMART 561_7 220 341 IPR006593 -
Spst4g01970 415 Gene3D - 196 380 - -
Spst4g01970 415 ProSiteProfiles Cytochrome b561 domain profile. 183 377 IPR006593 -
Spst4g01970 415 ProSiteProfiles DOMON domain profile. 68 180 IPR005018 -
Spst4g01970 415 CDD Cyt_b561_FRRS1_like 194 370 - -
Spst4g01970 415 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 24 373 - -
Spst4g01970 415 Pfam Eukaryotic cytochrome b561 221 342 IPR006593 -
Spst4g01970 415 SMART DOMON_3 93 180 IPR005018 -
Spst4g01970 415 Pfam DOMON domain 72 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01970 Spst-Chr4 60366612 60368701 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01970 - - gmx:100807608 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01970 4 60366612 60368701 Spst4g01970 4 60366612 60368701 ECH
Spst6g00578 6 5264407 5266762 Spst4g01970 4 60366612 60368701 PCT