Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00560 ATGGTGAAGGAAACGAGGTCTGATTTGAACCCATTGTTCGCGCAGAAGCATAACTATCATCATGTCTTCCTGAAGTTGGCAGTGTCGTGTCTCTTGGTGGGTCTCGCTATTCGCCTCCTCTTCACTGATTCCTTCAGTTTGTCCTCTGTTCTGCGCAATCCTCCCCCTCTTGCAAATGCAATACCAAACTCACCCTTTTTTTCTTCTCTGCCATCTTATTCTGTTGATTTCCCGGTAAACCAGACCCAATCCTCTGCCCAAGATGCAGTGGAGTGCGATCTCTTTGTGGGAGATTGGGTGCCGGACCTAAATGGTCCAATGTATACTAATGAGAGCTGCCGTGTGATTGAAGATCATCAAAACTGCATGAGAAATGGAAGGCCTGATTCGGGGTACCTTTATTGGAGGTGGAACCCAAGGGGTTGTGATTTACCCAAGTTCAGTCCAAAAAAATTCCTTCACATGATGAGGGATAAATCATGGGCCTTTATTGGTGATTCCATCTCTCGCAACCATGTGCAATCTCTACTTTGCCTTCTCTCACAGGTGGAAGCAGCTGATGAGGTGTACCATGATGAGGGATATAAATCAAAGATATGGAAGTTCACCTCCTACAACTTCACCCTCTCAGTAATATGGTCCCCATTCCTTATGAAAGCAGATATATTCGAGGACATAAATGGAGTTTCTTCTTCAGAAACGCATCTACATCTTGACATCTTGGACGACAAGTGGACCAACCAATATAAGAATTTTGACTATGTTGCAATCGCAGGTGGCAAATGGTTCCTGAAGACAGCAATATACCATGAAAACAACACTGTAACAAGCTGCCACAAGTGCCATGGAAAGAATTTAACAGAGGTAGGATACCAACATGCATACCGCAAAGCATTGCAGCAAGTTTTTTATTTCATGACACAGTCAGAGCACAAAACGGTTGTGTTCTTCAGAACCACCACACCAGACCACTTTGAGAATGGGGAGTGGTTCAGCGGAGGGTACTGCAATACGACAGGACCCTTCAAAGAGGAGCAGATAGAAGTGAGGTACGAGGATTCCATCATGAGAAGCATTGAACTTGAAGAGTTTCACAAGGCCAAGAATGCAAGTGCCAACTTCAAACTTTTGGACACAACTGGACTCTCATTGTTGAGGCCCGATGGGCATCCAGGCCCATACCGCCAGTTCCACCCTTTGCTCAATGCTAAGGTCCAGAATGATTGCCTGCATTGGTGTCTCCCAGGCCCAATTGACTCCTGGAACGACATACTTTTGCAAATGTTGGCAATCTGA 1296 0.4545 MVKETRSDLNPLFAQKHNYHHVFLKLAVSCLLVGLAIRLLFTDSFSLSSVLRNPPPLANAIPNSPFFSSLPSYSVDFPVNQTQSSAQDAVECDLFVGDWVPDLNGPMYTNESCRVIEDHQNCMRNGRPDSGYLYWRWNPRGCDLPKFSPKKFLHMMRDKSWAFIGDSISRNHVQSLLCLLSQVEAADEVYHDEGYKSKIWKFTSYNFTLSVIWSPFLMKADIFEDINGVSSSETHLHLDILDDKWTNQYKNFDYVAIAGGKWFLKTAIYHENNTVTSCHKCHGKNLTEVGYQHAYRKALQQVFYFMTQSEHKTVVFFRTTTPDHFENGEWFSGGYCNTTGPFKEEQIEVRYEDSIMRSIELEEFHKAKNASANFKLLDTTGLSLLRPDGHPGPYRQFHPLLNAKVQNDCLHWCLPGPIDSWNDILLQMLAI 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00560 431 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 50 426 IPR029962 GO:0016413
Spst6g00560 431 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 144 428 IPR026057 GO:0016740
Spst6g00560 431 Pfam PMR5 N terminal Domain 91 143 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00560 Spst-Chr6 5139048 5141856 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00560 - - gmx:100795653 763.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00560 6 5139048 5141856 Spst4g01946 4 60118780 60122072 PCT