Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01946 ATGGTGAAGAGAGTGAGGTATGATTCGGGACCATTGTCCCTGCAAAAGCACAACCATGTGTGTGTCAAGTTAGGAGTCTCAATTTTCTTGGTGGGTCTCGCTGTTCGCCTTCTCTTGTGGGATTCATTCAGTTTCTCGTCAGTGGTGGAGACATCTCCTCTGGAAGATGCAAAAGCAGAGTCCCCTGTTTTATCTTCTGATATTCAGGCTTCTGATTCTGATGACTTTCCAGGAAGTAATCAGAATCAGAATCAGAATCAGACTCAAATCTCTAAAGACGAAAAATGTGATCTTTTTGTGGGAGAATGGGTGCCAGACCTATCTGGGCCAGTGTACACTAATGAGAGCTGCCGTGTGATTGAGCCTCATCAAAATTGTATGAAGAATGGACGTCCTGATTCAGGGTACCTTTACTGGAGGTGGAGTCCAAGAGACTGTGAATTGCCCAAGTTCAATCCCAAGAAGTTTCTTAAGCTCATGAGAAATAAATCATTGGCCTTCATTGGTGATTCCATCTCCCGTAACCATGTTCAATCCCTACTTTGCATTCTCTCAAAGGTGGAACCAGCTGTTGAGATCTACCATGACAAGGAATATAGATCAAAGATATGGAAATTTCGCTCTCACAACTTCACACTCTCAGTAATCTGGACCCCTTTCCTTGTTAAAGCAGCTATATTTGAGGACATGAATGGAGTGACCTCGGCAGAGATACAGCTTTATCTTGACACTCTAGACCAGTGGACCAACCAATATGAGAACTTTGACTATGTTGTCATTGGTGGTGGAAAATGGTTTCTCAAGACTGCAATATACCATGAAAACAGAACAGTCACCGGCTGCCACTACTGCCCTGGAAAGAACTTAACAGAACTAGGATTTGACTATGCATACCGCAGAGTACTCCAAGAAATTTTCAAATTCTTCGCAAACTCTAATCACAAAGCCACTGTTCTCTTTAGAACCACCACACCTGACCACTTTGAGAATGGGGAGTGGTTTAGTGGAGGGTATTGCAATAGAACTGTACCCTTCAAAGAGGGTCAGATTCATATGATAGATGTGGATTCCATCATGAGAGGCATTGAACTTGAAGAGTTTGAGAAGGCTGCTTCCCTAGGATCTCAAAGGGTGAACTTGCAACTTTTGGACACAACTCTCCTTTCATTGCTGAGACCAGATGGACATCCTGGACCTTACAGGAAGTTTCAGCCATTTGCAAAAGATAAGAATGCTAAAGTTCAGAATGATTGTCTACATTGGTGTTTGCCAGGACCAATTGACTCGTGGAATGACATAATAATGCAAATGCTAGTCAATGCCTGA 1326 0.4291 MVKRVRYDSGPLSLQKHNHVCVKLGVSIFLVGLAVRLLLWDSFSFSSVVETSPLEDAKAESPVLSSDIQASDSDDFPGSNQNQNQNQTQISKDEKCDLFVGEWVPDLSGPVYTNESCRVIEPHQNCMKNGRPDSGYLYWRWSPRDCELPKFNPKKFLKLMRNKSLAFIGDSISRNHVQSLLCILSKVEPAVEIYHDKEYRSKIWKFRSHNFTLSVIWTPFLVKAAIFEDMNGVTSAEIQLYLDTLDQWTNQYENFDYVVIGGGKWFLKTAIYHENRTVTGCHYCPGKNLTELGFDYAYRRVLQEIFKFFANSNHKATVLFRTTTPDHFENGEWFSGGYCNRTVPFKEGQIHMIDVDSIMRGIELEEFEKAASLGSQRVNLQLLDTTLLSLLRPDGHPGPYRKFQPFAKDKNAKVQNDCLHWCLPGPIDSWNDIIMQMLVNA 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01946 441 MobiDBLite consensus disorder prediction 69 90 - -
Spst4g01946 441 Pfam PMR5 N terminal Domain 94 147 IPR025846 -
Spst4g01946 441 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 148 437 IPR026057 GO:0016740
Spst4g01946 441 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 50 434 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01946 Spst-Chr4 60118780 60122072 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01946 - - gmx:100305942 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01946 4 60118780 60122072 Spst4g01946 4 60118780 60122072 ECH
Spst6g00560 6 5139048 5141856 Spst4g01946 4 60118780 60122072 PCT