Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00557 ATGGACAAAGTTATAGAAGAATTTGAGTTATTAACAAAGGATGCGGAAAGGGTTCAGAGGGAAACTCTAAAAAGGATTTTGGAAGATAACGCATCAGCTGAGTATTTGCAGAGTTTGGGTCTCAATGGAAGAACTGACCCCGAGAGTTTCAAGGCTTGTGTTCCACTGGTTACCCACAAAGAGTTGGAACCTTACATATACAGAATTATTGATGGTGATGCTTCTCCTATTCTCACAGGCAAGCGCATCACGACCTTGTCTTTAAGTTCTGGCACGACCCAGGGGAAGCCAAAATATGTACCTTGGAACGATGAATTGTATGAAACCACAATGCAGATATACCAGACCTCTTTTGCCTTTAGAAACAGAGAGTTTCCGATAAAAAATGGGAAGGCTTTAAGCTTTATATACGGAAGCAAAGAGTTCAAAACAAAGGGGGGTTTGGCAGCTAGAACTGCTACAAGCAATGTGTTTTGCAATGCTGGTTATAAGTGTGCAATGAGGGCACTCCAATCCCAATGCTGCAGCCCAGATGAAGTAATATTTGGTCCTGATTTTTTCCAATCATTATACTGCCATCTTTTGTGTGGTCTGATTTTCCGGGAGGAGATTCAGTTCGTTTCTTCTACATTTGCACATAGTATTGTCCATGCATTTAGAACCTTTGAACAAGTCTGGGAAGAACTTTGTATTGATATTAGAGAAGGGGTTCTCACCAGCAGTGTCACTGTCCCTTCCATTCGAATGGCAATGTCTAAACTGCTCAAGCCAAACCCAAAATTAGCCAACTTGATCCACAAAAAATGCACGGGGTTGAGCAACTGGTACGGCTTGATACCAGAGCTTTTTCCCAACGCTAAGTATATTTATGGCATCATGACTGGGTCAATGGAGCCTTATTTGAAGAAGTTGAGGCACTATGCAGGGGAGCTGCCTTTGTTGACTGCTGACTATGGATCTTCTGAGGGATGGATAGCAGCAAATGTGAACCCACAACAGCCTCCTGAATATGCCACATACGCTGTGCTTCCTCACATTGGTTACTTTGAATTCATTCCTCTCTCAGAGCTTGACAACACCAAAGGTGAACCTGATTTCCTTTGTATTGATTCTCAGCCTGTGAGCCTGACTGAAGTCAAGGTTGGTGAAGAGTATGAAATTGTTATGACCAATCTAGCAGGATTATACCGGTATAGATTGGGGGATGTGGTGAAGGTTATGGGATTCCACAATTCAACTCCAGAGCTAAAGTTTATTCGGCGTAGCAGTCTTCTGCTCAACATTAACATTGACAAGAACACGGAGAAGGATTTACAGTTAGCAGTGGAAGCGGCTGCAAAGTTGTTAGCAGAAGAAAAATTGGAAGTAGTTGATTTTAGTAGCCAAGTTGATTTATCCAAAGAACCGGGACACTATGTCATCTTCTGGGAAATCAGTGGGGAAGCGAGTGAAGAAGTACTCCACGAATGTTGTAACTGTTTGGACAAGTCTTTCGTTGATGCAGGCTACACCAGTTCTCGCAAAGTGAACTGCATCGGTGCCCTCGAACTACGAGTTGTTCGGAGAGGAACATTCCAGAAGATTCTGGACCATTACCTAGGACTAGGAACCGCTGTTAGTCAGTACAAGACACCAAGATGTGTTGTTTCTACAAACGCCAGGGTGTTGCAAATCTTGAGTGAAAATGTTGTCAATAACTACCTCAGTACTGCTTTCTAA 1719 0.4287 MDKVIEEFELLTKDAERVQRETLKRILEDNASAEYLQSLGLNGRTDPESFKACVPLVTHKELEPYIYRIIDGDASPILTGKRITTLSLSSGTTQGKPKYVPWNDELYETTMQIYQTSFAFRNREFPIKNGKALSFIYGSKEFKTKGGLAARTATSNVFCNAGYKCAMRALQSQCCSPDEVIFGPDFFQSLYCHLLCGLIFREEIQFVSSTFAHSIVHAFRTFEQVWEELCIDIREGVLTSSVTVPSIRMAMSKLLKPNPKLANLIHKKCTGLSNWYGLIPELFPNAKYIYGIMTGSMEPYLKKLRHYAGELPLLTADYGSSEGWIAANVNPQQPPEYATYAVLPHIGYFEFIPLSELDNTKGEPDFLCIDSQPVSLTEVKVGEEYEIVMTNLAGLYRYRLGDVVKVMGFHNSTPELKFIRRSSLLLNINIDKNTEKDLQLAVEAAAKLLAEEKLEVVDFSSQVDLSKEPGHYVIFWEISGEASEEVLHECCNCLDKSFVDAGYTSSRKVNCIGALELRVVRRGTFQKILDHYLGLGTAVSQYKTPRCVVSTNARVLQILSENVVNNYLSTAF 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00557 572 Coils Coil 1 21 - -
Spst6g00557 572 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 2 572 IPR004993 -
Spst6g00557 572 Pfam GH3 auxin-responsive promoter 7 550 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00557 Spst-Chr6 5122041 5125197 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00557 3 570 EF-hand Containing Proteins AT1G23160 39.108 6.70e-135 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00557 K14506 - gmx:100794598 1073.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00557 6 5122041 5125197 Spst4g01943 4 60094360 60097492 PCT