Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01943 ATGTTGGAGAAAGTGGAAGGATTTAACATGGAGAGAGTGATGGAGGAATTTGAGAGGGTGACAAAGGATGCTGGGAGGATTCAAAGGGAGACCCTGAAAAGGATTTTGGAAGATAACGCTTCTGCTGAGTACTTGTTGAAGTTGGGCCTGAATGGGAGGACTGACCCTGAGAGTTTCAAGGCCTTTGTTCCACTGGTCACTCACAAGGAACTGGAGCCTTATATCAATAGAATACTTAATGGTGATACTTCTTCTGTTCTCACTGGCAAACCCATCACCACCATGTCTTTGAGTTCTGGCACTACTCAGGGAAAGCCAAAATATGTGCCATGGAATGATGAACTGTTTGACACCACATTGCAGATATATCACACCTCTTTTGCCTTCAGGAACAGGGAATTTCCCTTAAACAATGGCAAGGCCTTGGGCTTTATCTACAGCAGCAAGCAGTTCAAGACTGAAGGGGGTGTGCTAGCTGGAACTGCCACAACCAATGTGTTCCGCAACCCAGGGTTCAGGAATGCAATGAAGGCCACTCAGTCCCCATTTTGCAGCCCTGATGAAGTTATATTTGGTCCTGATTTTCACCAATCATTGTACTGCCACCTCTTGTGTGGGCTAATCTTCAGGGAAGAAGTTCAGATGGTGTCTTCCACATTTGCACACAGCATTGTGTATGCTTTCAGGACCTTTGAGCAAGTGTGGGAGGAGCTTTGTGTTGATATCAAAGAAGGGGTTCTTAACAGCAAGGTCACAGTTCCATCCATTCGGACAGCCATGTCTAAGCTGCTCAAACCTGACCCTGAGCTGGCCAACTTGATCCACGGCAAGTGCATGGGGCTGAGTAACTGGTATGGCCTAGTACCAGAGCTTTTCCCCCATGTTAAGTATGTTTATGGAATCATGACTGGGTCAATGGAACCTTATTTGAAAAAGTTGAGGCATTATGCTGGAGAGTTGCCTTTGTTGACTTCTGACTATGGATCTTCTGAAGGGTGGGTAGGAACCAATGTGAAACCAAGAGTGCCACCCGAATTGGCCACTTACACTGTGCTTCCTCAAATTGGCTACTTTGAATTCATCCCTCTGAGAGAGCAAGAAGGAACTAAGGGAGATGCAAGTTTCCGTTGTATGGATCCTCAGCCTGTGGGACTCGCTGATGTCAAGGTGGGTGAGGAGTATGAGATTGTCATCACCAATCCTGCAGGCTTGTACAGGTATCGACTTGGTGATGTGGTGAAGGTTATGGGGTTCTATAACTCAGCTCCAGAAGTGAAGTTTGTTAGGCGTAGCAACCTTCTACTTAGCATCAACATTGACAAGAACACAGAGACAGATTTGCAGTTAGCTGTGGAAGCAGCATCTCAATTGTTGGCAGAGGAGAAATTGGACGTTGTAGACTACACAAGCCACATAGATATATCCAAAGAGCCAGGCCACTATGTGATATTCTGGGAAATCAGTGGGGAAGCAAGTGAAGAAGTGCTTGGTGGATGTTGCAACTGTTTGGACAAGTCTTTTGTGGATGCTGGCTACACCAGTTCTCGCAAAGTCAACTGCATTGGGGCCCTTGAACTCCGAGTTGTTCGGAGAGGAACATTCCAGAAGATTCTTGAGCACTTCCTCTCACAAGGAGCTGCTGTGAGTCAGTTCAAGACACCAAGATGTGTAGGCCCTACAAACACCAAAGTGTTGCAAATATTGAATGAAAATGTTGTGAAGAACTATCTCAGTACTGCCTTCAATTGA 1749 0.4597 MLEKVEGFNMERVMEEFERVTKDAGRIQRETLKRILEDNASAEYLLKLGLNGRTDPESFKAFVPLVTHKELEPYINRILNGDTSSVLTGKPITTMSLSSGTTQGKPKYVPWNDELFDTTLQIYHTSFAFRNREFPLNNGKALGFIYSSKQFKTEGGVLAGTATTNVFRNPGFRNAMKATQSPFCSPDEVIFGPDFHQSLYCHLLCGLIFREEVQMVSSTFAHSIVYAFRTFEQVWEELCVDIKEGVLNSKVTVPSIRTAMSKLLKPDPELANLIHGKCMGLSNWYGLVPELFPHVKYVYGIMTGSMEPYLKKLRHYAGELPLLTSDYGSSEGWVGTNVKPRVPPELATYTVLPQIGYFEFIPLREQEGTKGDASFRCMDPQPVGLADVKVGEEYEIVITNPAGLYRYRLGDVVKVMGFYNSAPEVKFVRRSNLLLSINIDKNTETDLQLAVEAASQLLAEEKLDVVDYTSHIDISKEPGHYVIFWEISGEASEEVLGGCCNCLDKSFVDAGYTSSRKVNCIGALELRVVRRGTFQKILEHFLSQGAAVSQFKTPRCVGPTNTKVLQILNENVVKNYLSTAFN 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01943 582 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 7 581 IPR004993 -
Spst4g01943 582 Pfam GH3 auxin-responsive promoter 16 557 IPR004993 -
Spst4g01943 582 Coils Coil 10 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01943 Spst-Chr4 60094360 60097492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01943 14 579 EF-hand Containing Proteins AT1G23160 40.103 1.39e-141 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01943 K14506 - gmx:100813492 1097.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01943 4 60094360 60097492 Spst4g01943 4 60094360 60097492 ECH
Spst6g00557 6 5122041 5125197 Spst4g01943 4 60094360 60097492 PCT