Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00534 ATGTCCCTACTCATCCATTCCTCGGAAGCGTTCTTTGTCCCCAAAATTGTGCACAACCGTAAACCTAAACCCAGCAATCTTTACTACTTTAAACCCCTCACAAAGGGCAAGACAATTGGGTTAAAAGTGAGTTGCAAAGTTAAGGATTATGGGGTTTTGGGTTTGGATCAGAATTTAAGTTCGTACGGTCATTTTTCGGTGAGCAAAGAAGAAGAAGAAAAGCAAGAATATTACGTGAATTTGGGGTATGCTCTTCGGTCTCTGAGGGAGGACTTCCCTTCCCTCTTCCACAGAGAACTCTCCTTCGACATCTACAGGGATGATATTGTGTTCAAAGATCCTTTGAACACGTTCGTTGGCATTGAGAGTTACAAATCAATCTTCTGGGCTCTACGGTTTCATGGCAGGATGTTTTTCAAGGCTTTGTGGATTGACTTAGCCAGCATGTGGCAGCCTGCTGAGAATGTCATTATGGTTCGGTGGACTGTTCATGGAATTTCACGAGGACCATGGGAGAGCCGTGGGAGGTTTGATGGAACCTCTGAGTATAAACTCGACAAGAATGGCAAGATTTTCCAACACCGTGTTGACAATGTTGCTCACATCACATTTCCTAAATTTAAAGTGCTGCGTGTGGAAGAATTTCTTCAGTCTATTGGCTGCCCCTCTACTCCAAGACCAACTTATTTTGAAACATCCTCGTTTACAAAAGAAAACTTGCTGTCTTGTTGCTCAAGTTCTTCCAGACAGTTTTGCAGTTGTTAG 765 0.4314 MSLLIHSSEAFFVPKIVHNRKPKPSNLYYFKPLTKGKTIGLKVSCKVKDYGVLGLDQNLSSYGHFSVSKEEEEKQEYYVNLGYALRSLREDFPSLFHRELSFDIYRDDIVFKDPLNTFVGIESYKSIFWALRFHGRMFFKALWIDLASMWQPAENVIMVRWTVHGISRGPWESRGRFDGTSEYKLDKNGKIFQHRVDNVAHITFPKFKVLRVEEFLQSIGCPSTPRPTYFETSSFTKENLLSCCSSSSRQFCSC 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00534 254 SUPERFAMILY NTF2-like 102 196 IPR032710 -
Spst6g00534 254 PANTHER RIKEN CDNA 2310061I04 GENE 67 231 IPR018790 -
Spst6g00534 254 Pfam Uncharacterized conserved protein (DUF2358) 85 194 IPR018790 -
Spst6g00534 254 Gene3D - 99 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00534 Spst-Chr6 4919664 4920680 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00534 - - gmx:100792423 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00534 6 4919664 4920680 Spst4g01897 4 59540295 59542626 PCT