Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01897 ATGGCCCTTCTAATCCACTCCCCGGAAATATCCGTTGCTCACCAAATTGCTCCAAACCCTAACCCTAAGCTGACCAAAGTCCACAGCTTCAGACCCCACACTAAGGGCAAAGCGTTTGGGTCGACGCGCGGGCTGAGAATTTCTTGCAAAGTGAAAGATTGTGCAGTTTTGGATTTGGGTTTGGACGAGAACGTGAAATCGTACGGTCAATTTTGGGTTCCTGTGAAGCCAGGGTCGAAGAAGGGCAAAGAGGAGGAGGAAGAGAAGCAAAATTACTATGTGAATGTGGGATATGCGATCCGAACTTTGAGGGAGGAATTCCCTGATCTCTTCTACAGGGAACTTAGCTTTGACATATACAGGGATGATATTGTGTTTAAGGATCCAATGAACACGTTCATTGGTATTGAGAATTACAAATCTATCTTCTGGGCACTACGATTCCATGGCAAGATATTTTTCAAAGCTTTGTGGGTTGACATAAGTAGTGTATGGCAGCCTGTTGAGAATGTCATCATGGTTCGCTGGACTGTTCATGGGATCCCACGAGTTCTATGGGAAAGCCGTGGTAGGTTTGATGGAACCTCTGAGTATAAACTCGACAAGCAAGGCAAGATTTTTGAGCACAGGGTTGACAACATTGCTATGAATTCACCTCCTCGGTTCAAAGTATTGAATGTGGCAGAATTAATTCAATCTATTGGCTGCCCCTCGACTGCAAGACCAACCTATTTTGAATCATCTTCACCTCCCGAGAAAACGTAG 765 0.4497 MALLIHSPEISVAHQIAPNPNPKLTKVHSFRPHTKGKAFGSTRGLRISCKVKDCAVLDLGLDENVKSYGQFWVPVKPGSKKGKEEEEEKQNYYVNVGYAIRTLREEFPDLFYRELSFDIYRDDIVFKDPMNTFIGIENYKSIFWALRFHGKIFFKALWVDISSVWQPVENVIMVRWTVHGIPRVLWESRGRFDGTSEYKLDKQGKIFEHRVDNIAMNSPPRFKVLNVAELIQSIGCPSTARPTYFESSSPPEKT 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01897 254 Pfam Uncharacterized conserved protein (DUF2358) 99 209 IPR018790 -
Spst4g01897 254 PANTHER RIKEN CDNA 2310061I04 GENE 58 247 IPR018790 -
Spst4g01897 254 SUPERFAMILY NTF2-like 115 211 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01897 Spst-Chr4 59540295 59542626 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01897 - - gmx:100792423 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01897 4 59540295 59542626 Spst4g01897 4 59540295 59542626 ECH
Spst6g00534 6 4919664 4920680 Spst4g01897 4 59540295 59542626 PCT