Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00386 ATGAACCTCTCTCATCTTTCTCGTAGAACGCAAAACATGGATAACAAAACCACTGAACCAAGCGATTTTACGGCCCCTCTTCTCCCCACAAGTTATGGTGCCAATGATGATGGCGTTGACTTTCTGGAAAAGGGACACGACGGAGCTTCTTCCGTACCAACTACTCTTTTACTCACCACCCTCGTCGCTGTGTTTGGTTCCTACGTTTTTGGCTCTGCTATTGGGTATTCATCACCTACTCAATCAGGAATCATGCGTGACCTCAATCTCGGAGTGGCCCAGTACTCAATTTTTGGTTCGATATTGACTATTGGAGCTATGATTGGTGCTGTTGTTAGTGGAAGAATAGCAGATTATGCAGGTCGTCGAGTTGCCATGGGGTTTTCCCAGATTTTCTGCATCTTGGGATGGTTTGCCATAACATTCTCAAAGATTGCTTGGTGGCTTTATGTTGGAAGACTGTTGATAGGATGTGGGATTGGCCTTCTATCTTATGCGGTACCTGTTTATGTAGCAGAAATAACACCCAAGAATCTTCGAGGGGCATTCACTGCAGTTCATCAGTTAATGATTTGTTGTGGGATGTCATTAACTTATCTTATTGGAGCATATGTCAATTGGAGGATCTTGGCTCTAATAGGAATTATTCCGTGTCTTGTGCAGCTTCTGAGTCTGCCCTTAATTCCTGATTCTCCCAGGTGGCTGGCCAAGGTCGGTCGCTTAAGAGAGAGTGATTCTGCTTTACAGCGCCTCAGGGGTAAGGATGCTGATGTTTATCAAGAGGCCACAGAAATTAGAGATTATACAGAAGCCTTTCAGAAGCAAACAGAAGCTAGCATCATTGGCTTATTTCGAATGCAGTATTTGAAGTCACTTATCGTAGGAGTCGGCTTAATGATACTGCAACAGTTTGGAGGGATTAATGGCATTGTTTTTTATGCAAACTCTATATTTGTATCTGCTGGGTTTTCAGAAAGTATCGGAACAGTAGCAATGGTTGCCGTTAAGATTCCAATGACAACTTTAGGAGTACTTTTAATGGATAAATCTGGAAGAAGACCACTTCTGCTGGTGTCTGCGGTGGGAACATGCTTAGGATGCTTCCTCGCTGCCTTGTCATTTGTCTTGCAGGACTTAGACAAATGGAGGGGAGTTAGCCCCATTATAGCCCTAGTGGGTGTACTGGTATACGTGGGATCTTACTCTATAGGCATGGGAGCAATTCCTTGGGTTATAATGTCTGAGATATTTCCCATCAACGTGAAGGGCTCTGCTGGAAGCCTTGTGACTTTGGTTAGCTGGTTGTGTTCTTGGATTATATCATATGCTTTTAACTTCCTCATGAGTTGGAGTTCAGCCGGAACTTTCTTCATGTTCTCTGCCATATGTGGCTTCACTGTGCTATTCGTAGCAAAACTGGTACCAGAGACAAAGGGGCGCACATTAGAAGAAATTCAAGCTTCTTTGAGTTCATATTCTTCAAAAAGATGA 1491 0.4353 MNLSHLSRRTQNMDNKTTEPSDFTAPLLPTSYGANDDGVDFLEKGHDGASSVPTTLLLTTLVAVFGSYVFGSAIGYSSPTQSGIMRDLNLGVAQYSIFGSILTIGAMIGAVVSGRIADYAGRRVAMGFSQIFCILGWFAITFSKIAWWLYVGRLLIGCGIGLLSYAVPVYVAEITPKNLRGAFTAVHQLMICCGMSLTYLIGAYVNWRILALIGIIPCLVQLLSLPLIPDSPRWLAKVGRLRESDSALQRLRGKDADVYQEATEIRDYTEAFQKQTEASIIGLFRMQYLKSLIVGVGLMILQQFGGINGIVFYANSIFVSAGFSESIGTVAMVAVKIPMTTLGVLLMDKSGRRPLLLVSAVGTCLGCFLAALSFVLQDLDKWRGVSPIIALVGVLVYVGSYSIGMGAIPWVIMSEIFPINVKGSAGSLVTLVSWLCSWIISYAFNFLMSWSSAGTFFMFSAICGFTVLFVAKLVPETKGRTLEEIQASLSSYSSKR 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00386 496 FunFam sugar transporter ERD6-like 6 50 489 - -
Spst6g00386 496 MobiDBLite consensus disorder prediction 1 26 - -
Spst6g00386 496 SUPERFAMILY MFS general substrate transporter 60 486 IPR036259 -
Spst6g00386 496 PRINTS Sugar transporter signature 302 312 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst6g00386 496 PRINTS Sugar transporter signature 67 77 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst6g00386 496 PRINTS Sugar transporter signature 391 412 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst6g00386 496 PRINTS Sugar transporter signature 414 426 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst6g00386 496 PRINTS Sugar transporter signature 150 169 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst6g00386 496 NCBIfam sugar porter family MFS transporter 60 485 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst6g00386 496 ProSitePatterns Sugar transport proteins signature 1. 113 129 IPR005829 GO:0016020|GO:0022857|GO:0055085
Spst6g00386 496 CDD MFS_GLUT6_8_Class3_like 62 484 IPR044775 GO:0008643|GO:0051119
Spst6g00386 496 PANTHER - 54 486 - -
Spst6g00386 496 MobiDBLite consensus disorder prediction 1 25 - -
Spst6g00386 496 Pfam Sugar (and other) transporter 60 487 IPR005828 GO:0016020|GO:0022857|GO:0055085
Spst6g00386 496 ProSiteProfiles Major facilitator superfamily (MFS) profile. 59 478 IPR020846 GO:0022857
Spst6g00386 496 Gene3D MFS general substrate transporter like domains 48 491 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00386 Spst-Chr6 3659992 3664385 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00386 43 420 Organic Solute Cotransporters AT1G54730 65.344 1.17e-174 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00386 K03444 - gmx:100817150 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03249 1 40962989 40967148 Spst6g00386 6 3659992 3664385 ECH
Spst6g00386 6 3659992 3664385 Spst6g00386 6 3659992 3664385 ECH