Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00381 ATGGACGGTGGTACTAATAGCGCAGAACCAAGCGAAGTTTCAAGTCCTTTGCTTTCCACAGAATTACAAGCTTATGCTGGTAACGATGGGGTTGAGTGTGAGGAAAAGAGGCAGAAAGAAACTTGGTCGGTACCACCTATTCTTATACTTACCACCCTTGTTGCTGTTTCTGGTTCTTACGTTTTTGGGGCTGCTGTGGGATATTCGTCTCCTGCTCAAACTGGAATCATGGATGATCTCAATTTCGGCGTGGCTGAGTATTCACTTTTTGGATCAATACTGACAATTGGAGCAATGTTTGGTGCCATCGTAAGTGGTAGACTAGCAGACTACGCAGGTCGACGAGCCGCTATGGGCTTCTCCGAAGTATTCTGCATCTTGGGATGGCTTGCCATAGCATTCTCAAAGGTTTACTACTTCATAGACTTCATCTCATGTTTCTCAGAAGATGCTTACATGACAGTTGCATATGATCCTGTTGGCTGGTGGCTTTATGTTGGAAGGTTGTTGGTAGGGTGTGGGATGGGCCTTCTATCTTATGTGGTACCAGTTTATGTAGCTGAAATAACACCCAAGAATCTCCGAGGGGGATTCACATCAGTTCATCAGTTAATGATTTGTTGTGGGGCATCATTGACTTATCTTATTGGAGCGTTCTTTAATTGGCGGATTTTGGCTCTAATAGGAACTATTCCGTGTCTTGTACAACTTTTGGGTCTATTCTTTATTCCCGAGTCTCCTAGGTGGTTGGCAAAATTTGGTCACTGGGAAAAGAGTGAATCTGTTCTACAGCGTCTTAGAGGAAAGAATGCTGATGTTTCTCAAGAAGCCACTGAAATTAGAGATTTTACCGAAGCCCTTCAGAGGGAAACAGAAGCTAGCATTTTTGGCTTATTTCAATTGCAGTATTTGAAATCACTTACCGTAGGAGTTGGTCTGATGATACTACAACAGTTTGGAGGGGTTAACGGCATTGTTTTTTATGCAAGTTATATATTCATCTCTGCTGGATTTTCGGGAAGTTTTGGAATGATAGCAATGGTTGCTGTTCAGATTCCAATGACAACTTTGGGAGTACTTTTGATGGATAAATCTGGGAGACGACCACTTCTGCTGATCTCTGCATCGGGAACATGCTTAGGATGCTTCCTTGCAGCCCTATCATTCTTCTTAAAGGACCTACATAAATTGAAGGAAGTCAGTCCCATTCTGGCACTTGTTGGTGTACTGGTATATACAGGATCATTCTCTCTTGGCATGGGGGGAATCCCCTGGATTATAATGTCTGAGATATTTCCCATTAATGTGAAGGGCTCTGCAGGAAGTCTTGTAACTTTGGTTAGCTGGCTGTGTTCTTGGATTGTATCATATGCCTTTAACTTCCTCATGAGTTGGAGTTCAGCAGGAACTTTCTTCATATTCTCCACCATATGTGGCTTCACCGTTCTGTTCGTGGCACAACTAGTGCCGGAGACGAAGGGGCGCACACTAGAAGAAGTTCAAGCATCCCTCAAGAGCTGA 1521 0.4352 MDGGTNSAEPSEVSSPLLSTELQAYAGNDGVECEEKRQKETWSVPPILILTTLVAVSGSYVFGAAVGYSSPAQTGIMDDLNFGVAEYSLFGSILTIGAMFGAIVSGRLADYAGRRAAMGFSEVFCILGWLAIAFSKVYYFIDFISCFSEDAYMTVAYDPVGWWLYVGRLLVGCGMGLLSYVVPVYVAEITPKNLRGGFTSVHQLMICCGASLTYLIGAFFNWRILALIGTIPCLVQLLGLFFIPESPRWLAKFGHWEKSESVLQRLRGKNADVSQEATEIRDFTEALQRETEASIFGLFQLQYLKSLTVGVGLMILQQFGGVNGIVFYASYIFISAGFSGSFGMIAMVAVQIPMTTLGVLLMDKSGRRPLLLISASGTCLGCFLAALSFFLKDLHKLKEVSPILALVGVLVYTGSFSLGMGGIPWIIMSEIFPINVKGSAGSLVTLVSWLCSWIVSYAFNFLMSWSSAGTFFIFSTICGFTVLFVAQLVPETKGRTLEEVQASLKS 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00381 506 ProSiteProfiles Major facilitator superfamily (MFS) profile. 51 493 IPR020846 GO:0022857
Spst6g00381 506 NCBIfam sugar porter family MFS transporter 59 500 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst6g00381 506 CDD MFS_GLUT6_8_Class3_like 49 499 IPR044775 GO:0008643|GO:0051119
Spst6g00381 506 Gene3D MFS general substrate transporter like domains 41 506 IPR036259 -
Spst6g00381 506 PRINTS Sugar transporter signature 406 427 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst6g00381 506 PRINTS Sugar transporter signature 165 184 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst6g00381 506 PRINTS Sugar transporter signature 317 327 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst6g00381 506 PRINTS Sugar transporter signature 429 441 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst6g00381 506 PRINTS Sugar transporter signature 59 69 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst6g00381 506 Pfam Sugar (and other) transporter 52 502 IPR005828 GO:0016020|GO:0022857|GO:0055085
Spst6g00381 506 PANTHER - 42 144 - -
Spst6g00381 506 FunFam sugar transporter ERD6-like 6 144 504 - -
Spst6g00381 506 SUPERFAMILY MFS general substrate transporter 37 501 IPR036259 -
Spst6g00381 506 ProSitePatterns Sugar transport proteins signature 1. 105 121 IPR005829 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00381 Spst-Chr6 3635969 3639701 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00381 54 435 Organic Solute Cotransporters AT1G54730 67.016 4.59e-177 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00381 K03444 - gmx:100786465 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03249 1 40962989 40967148 Spst6g00381 6 3635969 3639701 ECH
Spst6g00381 6 3635969 3639701 Spst6g00381 6 3635969 3639701 ECH