Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g02080 ATGGATTTGGCATCTAATCTTGGTGGCAAGATTGAAAAGACGGAAGTGTTCTCTGCCGTTGAGAAGTATGAGAAGTATCATGTTTGCTATGGAGGTCAAGAGGAAGAGAGGAAAGCTAACTATAGCGACATGGTGAATAAATACTATGATCTTGTTACCAGCTTTTATGAGTTTGGCTGGGGGGAATCTTTCCATTTTGCACCCAGATGGAAAGAGGAATCTCTTCGGGAGAGCATCAAGCGACATGAACACTTCCTTGCTTTACAACTTGGACTGAAGCCAGGGCAGAAGGTTTTGGACGTTGGATGTGGAATTGGTGGACCATTAAGAGAAATTTCCCGATTCAGCTCAACTTCAATTACTGGGTTGAATAATAATGAGTACCAGATAACGAGAGGAAAGGAACTCAATTGCATTGCGGGAGTGGACCAGACTTGCAATTTTATCAAGGCTGACTTCATGAAAATGCCAATCCCAGACAACACTTATGATGCAGTGTATGCAATTGAAGCCACTTGTCATGCTCCAGATGCTTATGGATGCTATAAAGAGATTTTTAGAGTGTTAAAGCCGGGCCAATATTTTGCTGCCTATGAATGGTGCATGACTGATTCTTTTGATCCCCAAAACCCAGAGCACCAAAAAATCAAGGCAGAAATTGAGATTGGTGATGGGCTTCCTGACATTAGATTGACCACTAAGTGTCTTGAAGCTCTGAAGCAAGCAGGTTTTGAGGAGGATCCTCTCCTTTTTTCTGTGTACAAGGTAATATGGGAGAAAGATCTAGCAGCTGACTCTCCTCTTCCTTGGTACTTGCCTTTAGACAAAAGTCATTTCTCACTTAGTAGCTTCCGCCTAACTGCTGTTGGGCGACTTTTCACCAAAAACATGGTAAAGTTTCTGGAGTATGTTGGACTGGCTCCAAAGGGTAGTCTAAGGGTTCAAGATTTTTTGGAGAAGGCTGCGGAGGGACTAGTCGAAGGAGGAAAGAAAGAGATTTTCACACCAATGTACTTCTTCTTGGCACGGAAGCCCGAGTCAGACATTAACTAA 1053 0.4302 MDLASNLGGKIEKTEVFSAVEKYEKYHVCYGGQEEERKANYSDMVNKYYDLVTSFYEFGWGESFHFAPRWKEESLRESIKRHEHFLALQLGLKPGQKVLDVGCGIGGPLREISRFSSTSITGLNNNEYQITRGKELNCIAGVDQTCNFIKADFMKMPIPDNTYDAVYAIEATCHAPDAYGCYKEIFRVLKPGQYFAAYEWCMTDSFDPQNPEHQKIKAEIEIGDGLPDIRLTTKCLEALKQAGFEEDPLLFSVYKVIWEKDLAADSPLPWYLPLDKSHFSLSSFRLTAVGRLFTKNMVKFLEYVGLAPKGSLRVQDFLEKAAEGLVEGGKKEIFTPMYFFLARKPESDIN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g02080 350 Gene3D Vaccinia Virus protein VP39 19 257 IPR029063 -
Spst5g02080 350 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 39 346 IPR029063 -
Spst5g02080 350 Pfam Sterol methyltransferase C-terminal 282 346 IPR013705 GO:0006694|GO:0008168
Spst5g02080 350 CDD AdoMet_MTases 97 192 - -
Spst5g02080 350 FunFam Methyltransferase 19 280 - -
Spst5g02080 350 PANTHER ZGC:194242 2 345 - -
Spst5g02080 350 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 48 345 IPR030384 GO:0008168
Spst5g02080 350 Pfam Methyltransferase domain 99 196 IPR013216 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g02080 Spst-Chr5 56265427 56270542 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g02080 90 246 Acyl Lipid Metabolism Gene Families AT1G73600 31.210 2.94e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g02080 K00559 - gmx:548073 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02916 2 28923220 28932789 Spst5g02080 5 56265427 56270542 PCT