Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02916 ATGGATTTGGCATCAGGTGTTGGTGGAAAGATTGAAAAATCTCAAATCTTGTCCGCGGTTGAGAAGTACGAGAAGTACCATGTTTGTTACGGAGGCCAAGAGGAAGAGAGAAAAGCTAATTACACTGATATGGTTAATAAATACTATGATCTTTCTACTAGCTTTTATGAGTTTGGCTGGGGGCCATCTTTCCATTTTGCACACAGATGGAAAGGGGAATCTCTTCAGGAGAGCATTAAGAGACATGAGCACTTCCTTGCTTTACAACTTGTCTTAAAGCCTGGACAAAAGGTCTTGGATGTTGGATGTGGAATTGGGGGGCCACTCAGAGAAATTGCTCGATTCAGCTCAACATCAGCACTCGATCGCATGGCTGGAGTGGACAAGACTTGCAACTATGTCAAGGCTGACTTCATGAAAATGCCATTCACAGACAACAGTTTTGATGCAGTGTATGCAGCTGAAGCTACATGTCATGCGCCAGATGCTTGTGGATGCTACAAAGGGATCTTTAGAGTGTTGAAGCCTGGTCAATATTTTGCTGCATATGAATGGTGCATGACTGATGTGTTTGATCCCAACAACGAAGAGCACCAAAAGCTAAAGGCGCAAATTGAGATTGGTGATGGACTTCCTGACATTAGATTGACCACACAATGTGCTGAAGCTCTGAAGCAAGCAGGTTTTGAGGTAATCTGGGAGAAAGATCTTGCAATTGATTCTCCTGTTCCTTGGTACTTTCCTCTGGATACAAGTCACTTCTCACTTAATAGCTTTCGCCTAACTGCTGTTGGACGATTTTTCACAAGAAACTCGGTGGGTACTGGAGTAAAGGCATTTGCTGTTCGAACTAAAGAAAAGGGGACGACATGTAACCACTACAGGAAGACTGGACATGATTCAACTATAAAGAGTGCAGGACATGAATTGGGATGGGGAAATTCATATGTTGGAGGAGGAAGAGGTCAGAATGCTAGAGCAAATGCAGCACAAACTAAAGGGATGGAAAGGCAACAAACAACAACAATTACTGAAAACACACAAAGCAGGAGGAATTGA 1059 0.4306 MDLASGVGGKIEKSQILSAVEKYEKYHVCYGGQEEERKANYTDMVNKYYDLSTSFYEFGWGPSFHFAHRWKGESLQESIKRHEHFLALQLVLKPGQKVLDVGCGIGGPLREIARFSSTSALDRMAGVDKTCNYVKADFMKMPFTDNSFDAVYAAEATCHAPDACGCYKGIFRVLKPGQYFAAYEWCMTDVFDPNNEEHQKLKAQIEIGDGLPDIRLTTQCAEALKQAGFEVIWEKDLAIDSPVPWYFPLDTSHFSLNSFRLTAVGRFFTRNSVGTGVKAFAVRTKEKGTTCNHYRKTGHDSTIKSAGHELGWGNSYVGGGRGQNARANAAQTKGMERQQTTTITENTQSRRN 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02916 352 MobiDBLite consensus disorder prediction 317 352 - -
Spst2g02916 352 PANTHER ZGC:194242 2 288 - -
Spst2g02916 352 Pfam Methyltransferase domain 99 181 IPR013216 GO:0008168
Spst2g02916 352 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 39 251 IPR029063 -
Spst2g02916 352 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 48 275 IPR030384 GO:0008168
Spst2g02916 352 MobiDBLite consensus disorder prediction 325 352 - -
Spst2g02916 352 CDD AdoMet_MTases 97 177 - -
Spst2g02916 352 Gene3D Vaccinia Virus protein VP39 33 248 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02916 Spst-Chr2 28923220 28932789 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02916 83 236 Acyl Lipid Metabolism Gene Families AT1G48600 31.138 4.86e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02916 K00559 - gmx:100818061 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02916 2 28923220 28932789 Spst5g02080 5 56265427 56270542 PCT