Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01011 ATGGCGGCATCTCTGTCCTCCGACTTCGATGATCTCCGCTCGCCGATACTTGCGGCAGCGGATAAGAAACCGGCGGCGGAGAAGCTCTGCATCGATGACATGCTGCAGAAGTACTGCGGCGAGTTCGGGCGGTGGCAGCTCAAGCACTTCATCTTCACCAGTCTCGCGTGGGCGCTCGAGGCCTTCCACACCATGGTCATGATCTTCGCCGACCGCGAACCAGACTGGAGGTGCGTCCCCGGGGCGGCCTGTGACGGCGGAGGGGATGGCGGCGTCTGTGGCCTCTCGCCGGAGGCGTGGGAGTGGGTCGGCGGCCGCCATGGCTCCACCGTATCGGAATGGAATCTGATTTGCGGTGATAAGTTCAAGATTGGGTTGGTTCAGGCCGTGTTCTTCGCTGGATGCATGATTGAAAATATTGATGGCAAGATTATTCAGAAGCAACACAATATTGACGCTGAATTTTCAGGGGCTGGAATATTTGGCCACCTCTCAGACTCCTCTCTAGGAAGAAAAGGTTCTCTCACAGTGGTTTGCGCCCTAAACACTCTCTTTGGCTGTTTAACAGCACTGTCCCCAAACTACTGGATCTACGTCCTCCTCCGCCTCCTCACCGGATTCAGCAGCGGCGGCGTTGGCCTCTGTGCCTTCGTCCTCGCCACCGAACCCATCGGCCCCACGAAGCGCGGCACCGCGGGCATGTCCACCTTCTACTTCTTCTCCGGCGGCATTGCACTTCTCTCTGGCATCGCTTACACCTTCCAAACATGGCGCTATCTCTATATAGCTTCCTCCATCCCCTCTTTCCTCTACATCATCCTTGTCCTACCCTTTATCTCTGAGTCCCCAAGATGGTACCTTGTTCGCGGGAAAGTAGCTGAAGCCACGAAGCTCATGTCCACCATTGCTTCTTCCAACGGGAAGCACCTTCCCGATGGTGTTCTCCTCGCACTCGACGACGAAGCATCGTCCGCAAAAAACCAAGGTTCAGGTCATGACATAACATTGGTGACATACAAAAACGAACACGTGGAAAACAAAGACGCGCTAGTTGGATCCATCGTGGACGTCGTTCGTTCCCCCATCACTCGTGTAAGGTTGCTCTTAGCGGTGGCTCTTAACTTATTAGGCTCCGTGGTGTACTACGGGCTTAGTTTAAACGTCGTGAACCTCGATACCAACCTTTACCTGAACGTAATGTTGAACTCCGTGGCGGAGATGCCGGCGTTTACGATAACGGCGGTGCTTTTGGACAGGTTTGGACGGAAGCCGTTGACGGTGGCGACGATGTGGTTTAGCGGGTTGTTTTGTTTGATGGGGAGTTTGATGGGCAACGTGGGGGTGTGGAAGGTGATGAGAATGGTATGTGGTGTTTTGGGGATATTTGGGATGGCGGGGACTTATAATTTGTTGTTTATTTACACGGCGGAGCTGTTTCCGACGGTGGTGAGGAACGCAGCGCTTGGATGCACCACGCAGGCGGCGCAAATGGGAGCTATATTGGCGCCGTTTGTGGTGGTTTTGGGTGGCTGGTTGCCATTTGCGGCGTTTGCAGCATGTGGAATAGTGGGAGGAATGTTTGCGTTTTATCTTCCAGAGACGCTGAATCAACCTCTATATGATACATTCACTGGAATGGAAGCAGGACTTGCTTGA 1656 0.5399 MAASLSSDFDDLRSPILAAADKKPAAEKLCIDDMLQKYCGEFGRWQLKHFIFTSLAWALEAFHTMVMIFADREPDWRCVPGAACDGGGDGGVCGLSPEAWEWVGGRHGSTVSEWNLICGDKFKIGLVQAVFFAGCMIENIDGKIIQKQHNIDAEFSGAGIFGHLSDSSLGRKGSLTVVCALNTLFGCLTALSPNYWIYVLLRLLTGFSSGGVGLCAFVLATEPIGPTKRGTAGMSTFYFFSGGIALLSGIAYTFQTWRYLYIASSIPSFLYIILVLPFISESPRWYLVRGKVAEATKLMSTIASSNGKHLPDGVLLALDDEASSAKNQGSGHDITLVTYKNEHVENKDALVGSIVDVVRSPITRVRLLLAVALNLLGSVVYYGLSLNVVNLDTNLYLNVMLNSVAEMPAFTITAVLLDRFGRKPLTVATMWFSGLFCLMGSLMGNVGVWKVMRMVCGVLGIFGMAGTYNLLFIYTAELFPTVVRNAALGCTTQAAQMGAILAPFVVVLGGWLPFAAFAACGIVGGMFAFYLPETLNQPLYDTFTGMEAGLA 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01011 551 ProSitePatterns Sugar transport proteins signature 1. 413 429 IPR005829 GO:0016020|GO:0022857|GO:0055085
Spst5g01011 551 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 42 539 - -
Spst5g01011 551 Pfam Sugar (and other) transporter 155 540 IPR005828 GO:0016020|GO:0022857|GO:0055085
Spst5g01011 551 Gene3D MFS general substrate transporter like domains 108 543 IPR036259 -
Spst5g01011 551 ProSitePatterns Sugar transport proteins signature 2. 204 229 IPR005829 GO:0016020|GO:0022857|GO:0055085
Spst5g01011 551 SUPERFAMILY MFS general substrate transporter 157 539 IPR036259 -
Spst5g01011 551 ProSiteProfiles Major facilitator superfamily (MFS) profile. 49 536 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01011 Spst-Chr5 9982748 9985739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01011 1 547 Organic Solute Cotransporters AT3G20660 64.000 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01011 K08202 - gmx:100818415 912.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01011 5 9982748 9985739 Spst5g01011 5 9982748 9985739 ECH
Spst5g01011 5 9982748 9985739 Spst11g00729 11 30461736 30463904 PCT