Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00729 ATGGCGACGACGTCGTCCAGTGATTACAAAGACCAAGGCGGCGATCGGTCACGGTCGCCGCTCATTCCTGCGGCGAAGAAGCCTGCCGGAGAGTTAGCGGAGAAGCTGTGCATAGACGAGATGCTGCAGAAGTACTGCGGCGAGTTTGGGCGGTGGCAGCTGAGGCACTTCATGCTGACGAGTATGGCGTGGGCCTTGGAAGCCTTCCACACGATGGTCATAATTTTCGCGGACCACGAACCGGAGTGGCGGTGCCTGGACGGTGCGGCCGGTTGGGGTTGCGACCCAGACGCGAAAAGCGTGTGCTGGTTCGAACCGGGTTCGTGGGAGTGGATCGGGAACTCGACCGTTACGGAGTGGGGGCTGTTTTGCGAGGACAAGTTTAAGGTCGGGCTGGTTCAGGCCGCCTTCTTCGGCGGCTGTATGATCGGTGCTGGAATATTCGGTCACCTCTCAGACTCGTTCCTCGGAAGAAAAGGCTCTCTCACAGTGGTTTGTGGCCTAAACGCCATTTTTGGCACCTTGACAGCCTTCTCTCCCAGCTTCTCATTCTACATCCTCTTCCGCTTCCTCACAGGCTGTAGCACAGGCGGCGCCGGCCTCTGCGCCTTCGTCCTCGCCACGGAGCCGGTAGGCCCCTCAAACCGCGGCACCACCGGCATGTGCACCTTCTACTTCTTCTCCTCCGGCATCGCGATCTTATCTGCCATCGCCTACATCTTTCCCACGTGGCAAAAACTCTACATAGCCTCTTCCATCCCCTCCCTCTTGTTCCTCCTCTTCATCCTCCCCTTCATCTCAGAGTCCCCAAGATGGTACCTCGTTAGAGGAAGAAAATTGGAAGCAATGCAAATCATGACCGCCATCGCCACTACCAACGGTAACCACATCCCAGAAGGGGTTGGTCTAACCCTAGACGATGATCAATCACCACAATTACCATCACTGTCAGCTTTATCATGCAATATGCAAGAACAAGTATTAGCAGAGGTCAACTCCTTAAAGAAATCTCAGCATCTCGAGAAATTAGTCGCTGACTCGACTCTTCTGGACTCGTCCAAGGGACCATCATGCCACGTGGCGGTGACCGGATCGCTCCTCGACGTCATTCGCTCGCCCATGACACGTTTGAGGTTGATCCTCGCCGTTGTCATCAACTTCCTATGCTCGGTGGTGTACTACGGGTTGAGCCTAAATGTGGTGAACCTGGGAACCAACCTGTACCTTACAGTGATACTCAACGCCGTGGCAGAGATGCCAGCGTTTATGATAACGGCGATGTTGCTGGATCGGTGGGGGAGGAAGCCGTTGACCATAGCGACGTTATGGTTCAGCGGCGCGTTCTGCCTTGCGGGGAGTTTGGTGAAAAACGTTGGGGTGTGGAAGGGTGTGAGAATGATCTGTGGGATTTTAGGGATTTTCGGGATGGCGGGGACGTATAATCTGCTGTTCATATACATGGCGGAGCTGTTCCCGACGGTGGTTAGGAACGCGGCGCTAGGGTGCGCCACACAGGCGGCGCAGATGGGTGCAATACTGGCGCCGCTGGTCGTCGTTTTGGGAGGGTCGTTGCCGTTCATTGTTTTTGCTCTGTGTGGAATCGGTGGGGGATTTTTTGCGTTTTATCTGCCGGAAACGCTGAACCAACCTCTCTATGATACGTTGACGGGAATGGAGGCTAAGCAAAATTGTGTTACCTCTTCCATTGTATGA 1713 0.5493 MATTSSSDYKDQGGDRSRSPLIPAAKKPAGELAEKLCIDEMLQKYCGEFGRWQLRHFMLTSMAWALEAFHTMVIIFADHEPEWRCLDGAAGWGCDPDAKSVCWFEPGSWEWIGNSTVTEWGLFCEDKFKVGLVQAAFFGGCMIGAGIFGHLSDSFLGRKGSLTVVCGLNAIFGTLTAFSPSFSFYILFRFLTGCSTGGAGLCAFVLATEPVGPSNRGTTGMCTFYFFSSGIAILSAIAYIFPTWQKLYIASSIPSLLFLLFILPFISESPRWYLVRGRKLEAMQIMTAIATTNGNHIPEGVGLTLDDDQSPQLPSLSALSCNMQEQVLAEVNSLKKSQHLEKLVADSTLLDSSKGPSCHVAVTGSLLDVIRSPMTRLRLILAVVINFLCSVVYYGLSLNVVNLGTNLYLTVILNAVAEMPAFMITAMLLDRWGRKPLTIATLWFSGAFCLAGSLVKNVGVWKGVRMICGILGIFGMAGTYNLLFIYMAELFPTVVRNAALGCATQAAQMGAILAPLVVVLGGSLPFIVFALCGIGGGFFAFYLPETLNQPLYDTLTGMEAKQNCVTSSIV 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00729 570 Pfam Sugar (and other) transporter 127 292 IPR005828 GO:0016020|GO:0022857|GO:0055085
Spst11g00729 570 Pfam Sugar (and other) transporter 390 552 IPR005828 GO:0016020|GO:0022857|GO:0055085
Spst11g00729 570 ProSitePatterns Sugar transport proteins signature 1. 425 441 IPR005829 GO:0016020|GO:0022857|GO:0055085
Spst11g00729 570 ProSiteProfiles Major facilitator superfamily (MFS) profile. 56 548 IPR020846 GO:0022857
Spst11g00729 570 MobiDBLite consensus disorder prediction 1 23 - -
Spst11g00729 570 Gene3D MFS general substrate transporter like domains 112 560 IPR036259 -
Spst11g00729 570 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 49 554 - -
Spst11g00729 570 SUPERFAMILY MFS general substrate transporter 122 551 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00729 Spst-Chr11 30461736 30463904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00729 10 563 Organic Solute Cotransporters AT3G20660 62.745 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00729 K08202 - gmx:100814182 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00729 11 30461736 30463904 Spst11g00729 11 30461736 30463904 ECH
Spst5g01011 5 9982748 9985739 Spst11g00729 11 30461736 30463904 PCT