Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00994 ATGGAGGACAAAGAAAAACTCAAGAAGTCCAAGGTTATCAAAATACACTCTCAAAAATCATGGGAACACTACATCTCTCATGCCACCAATCAAAAGTACCCTGTTGTGGTTCATTTCTCTGCTTTCTGGTGTGTGCCTTCTACAGTAATGAACCCTTTCTTTGAAGAACTGGCCTCCACTTATCAAGATGTTCTGTTTCTGACATTGGAAGTGGATGAGGTTAAGGAAATTGCCGCCAAGATGGAAATCAAAGCCATGCCCACTTTTCTGTTGCTGAGTGGAGGGACTCCAGTAGACAAAATTGTGGGGGCAAATCCTGAAGAAATAAGGAAAAGGATTGATCATTTTGTTCACTCAAGTCGCTCCTACAAATCTGAGTAA 381 0.4147 MEDKEKLKKSKVIKIHSQKSWEHYISHATNQKYPVVVHFSAFWCVPSTVMNPFFEELASTYQDVLFLTLEVDEVKEIAAKMEIKAMPTFLLLSGGTPVDKIVGANPEEIRKRIDHFVHSSRSYKSE 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00994 126 Gene3D Glutaredoxin 1 123 - -
Spst5g00994 126 SUPERFAMILY Thioredoxin-like 6 117 IPR036249 -
Spst5g00994 126 Pfam Thioredoxin 14 114 IPR013766 -
Spst5g00994 126 CDD TRX_family 34 114 - -
Spst5g00994 126 ProSiteProfiles Thioredoxin domain profile. 1 118 IPR013766 -
Spst5g00994 126 PANTHER THIOREDOXIN 12 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00994 Spst-Chr5 9615768 9617259 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00994 K03671 - gmx:100813627 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00994 5 9615768 9617259 Spst5g00994 5 9615768 9617259 ECH
Spst5g00994 5 9615768 9617259 Spst11g00777 11 31515307 31516594 PCT