Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00777 ATGGAAGGCCAAAAACAGCTCTTAAAGTCCAAGGTTGTGAAAATTAACTCAAGAAAATCATGGGAACACCACATCACTGATGCTACCAATAAAGGCTTCCCTGTTATGGTTCATTTCTCTGCTTATTGGTGCATGCCCTCTATAGCTATGAATCCTTTCTTTCAAGAACTGGCCTCCACCTATCAAAATGTTCTCTTTCTTAATGTGGATGTTGATGAGGTCAAGGAAGTTGCTTGCAAGTTGGAAATCAAAGCCATTCCTACCTTTTTGTTGATGAATGGAGGAGCACCAGTGGACAAAACTGTGGGTGCAAACCCTGATGAGTTAAGGAAAAGAATCAATTGTTTTATTCACCACAAAAATTCCCTCAAGTGA 375 0.4 MEGQKQLLKSKVVKINSRKSWEHHITDATNKGFPVMVHFSAYWCMPSIAMNPFFQELASTYQNVLFLNVDVDEVKEVACKLEIKAIPTFLLMNGGAPVDKTVGANPDELRKRINCFIHHKNSLK 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00777 124 CDD TRX_family 19 114 - -
Spst11g00777 124 Gene3D Glutaredoxin 1 122 - -
Spst11g00777 124 ProSiteProfiles Thioredoxin domain profile. 1 118 IPR013766 -
Spst11g00777 124 PANTHER THIOREDOXIN 12 114 - -
Spst11g00777 124 SUPERFAMILY Thioredoxin-like 8 115 IPR036249 -
Spst11g00777 124 Pfam Thioredoxin 14 113 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00777 Spst-Chr11 31515307 31516594 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00777 K03671 - gmx:100306379 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00777 11 31515307 31516594 Spst11g00777 11 31515307 31516594 ECH
Spst5g00994 5 9615768 9617259 Spst11g00777 11 31515307 31516594 PCT