Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00881 ATGAGCGCAGGCATGGACAAAGAATTCTGCATGATTCCCGTAACTGCGCCCAACTCCACCGACGTATTCATGAATTTTTCCGACACAGTTTTTTGCTTCTGGGAGGATCTGCAGGACTCGTCGGAGAATTCCTCTGACTCCGGCGACCCTCTTGGCGACGACGATGAAAGTCTTTGCTCTGTCGAAAACAATCATAAAGCTTTCTGGGAAGAACAATACCACCTCCTCCAGGAAACTTTATGCAGGAGTAGCTCGATAGAGGCAAGAGTTCGGCAAGCTACAAAGGAAGCTCTGAGAGAGTTGAATAGGAGGGATGTGCAGTGCATTTGCCGGGGAGCAGAGAATGTTAAGAGCTGTCGGAATTGTTTGAGGAGGGAAACATGTGATCAATTGTTGAAACTTGGTTACAATTCTTCCCTTTGCACATCTAAATGGAGGACTTCGTCGGAGATGCAAATATCAGGGGAGCACAGTTATCTGGAAGTGATGGACAACTCAAACATTAAAAGAGGAGAGGTGAGAGTGGTAATTGAATTGAATTTTCGTGCCGAATTTGAGATGGCATGTGCCACTGAAGAATACAATAAATTAATGAACAGGTTACCCGAGGTTTTTGTTGGAAAAACAGAGAGGTTACGAGCCATAATTAATATTATGTGCTCAGCTGCAAAAAAATGCATGAAGGAAAAAAAAATGCACCTGGGACCTTGGAGGAAACAACGGTATATGCAAGCCAAGTGGCTTGGCATCACTGATAGACCCATAGCAGTGCCATTTCTCACTGTTTGCTCTTCACGACCACGGAAATATAAGGCTTCAATGCTCACTTACGATTTAGTAGAAAACATTTCTGGGCTTCACTGTGTTGTGCTTTGCTGA 879 0.4425 MSAGMDKEFCMIPVTAPNSTDVFMNFSDTVFCFWEDLQDSSENSSDSGDPLGDDDESLCSVENNHKAFWEEQYHLLQETLCRSSSIEARVRQATKEALRELNRRDVQCICRGAENVKSCRNCLRRETCDQLLKLGYNSSLCTSKWRTSSEMQISGEHSYLEVMDNSNIKRGEVRVVIELNFRAEFEMACATEEYNKLMNRLPEVFVGKTERLRAIINIMCSAAKKCMKEKKMHLGPWRKQRYMQAKWLGITDRPIAVPFLTVCSSRPRKYKASMLTYDLVENISGLHCVVLC 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00881 292 PANTHER OS03G0796600 PROTEIN 28 253 IPR006502 -
Spst5g00881 292 NCBIfam uncharacterized plant-specific domain TIGR01615 126 253 IPR006502 -
Spst5g00881 292 Pfam PDDEXK-like family of unknown function 28 253 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00881 Spst-Chr5 8107412 8109188 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00881 - - gmx:100815222 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00881 5 8107412 8109188 Spst5g00881 5 8107412 8109188 ECH
Spst5g00881 5 8107412 8109188 Spst11g00977 11 33999602 34000854 PCT