Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00977 ATGGCCGAAGAATTCACTAGTCCCACTACTGGCCCAAGCTCCGACGAGGTCAGTTTAGCTGATATAGTTTTTGGGAGTTGGGATTCATTCAATTTCAGTGACGATGATGTTCACGACAACCATAATATAGATGATGTTCTTGATGATAACAACGATGGTCATAGTATTGATACTTCGGAGAAGAATAAAGTCTTCTGGGAAGAAAAATATCATCTTCTTAAGAAGGGAATTTTGTGCAGGAGTGGTTCATGGGAGAGAAAAGTAGGGGAAGCAACGAAGGAGATTGTAAGAGAAATGAAGTATTCGGAGATGGTGTGTAGTTGTCTGCAGAAAGTGGTGGCTAAGAATTGCAGGAATTGCTTGCTGAGAGAAATACGGGATCGATTGTTGAAGCTTGGCTACAATTGTTGCATCTGCAAGTCTAGATGGAGGAGTTCATCAGAAATCATATCAGGTATAATTGTGAGCATACGTCATGGTTATGGTTTTGGTTGTGTTGTGATGGACCCTTGTGAAATGATCAAGTGGTGTTTAATTGCTGTAGGGGAGCACAGTTATTTGGAAGTGACAGAAAATTTATCAAACACCAAAAGAGAAGCAGTAAAACTGGTGATTGAGTTGAGCTTCAGAGCTGAATTCGAGATGGCACGTACGAATGAAGAATACAAGCAATTAGTGAAGCGTTTGCCTGAAGTATTTGTAGGGAAAGCAGAGAGATTAAGAGGTTTGGTGAAGATTATGTGCTCAGCTGCTAAAAAATGCATGAAGGAGAAGAAAATGCACATTGGACCATGGAGGAAACACAAGTACATGCAAGCTAAGTGGTTTGGCACGCGCGAAAGGTCGACAATGGAACCACTTCTGATAATGAACTCTTCTCGGATACCAAAACCTAAGGCTTCAATGCTCACTTTTGATTTAATGGAAAACATTCATGGGTTGCACTGTACTACAGTTGAGGTTATGGATAGGAGGAGTTTATTTGCTAAACTGTTAAATGTTTTGCCAACAATCTTCATCCAAGTTTTGGTGTTGCTGATTATCTAG 1047 0.404 MAEEFTSPTTGPSSDEVSLADIVFGSWDSFNFSDDDVHDNHNIDDVLDDNNDGHSIDTSEKNKVFWEEKYHLLKKGILCRSGSWERKVGEATKEIVREMKYSEMVCSCLQKVVAKNCRNCLLREIRDRLLKLGYNCCICKSRWRSSSEIISGIIVSIRHGYGFGCVVMDPCEMIKWCLIAVGEHSYLEVTENLSNTKREAVKLVIELSFRAEFEMARTNEEYKQLVKRLPEVFVGKAERLRGLVKIMCSAAKKCMKEKKMHIGPWRKHKYMQAKWFGTRERSTMEPLLIMNSSRIPKPKASMLTFDLMENIHGLHCTTVEVMDRRSLFAKLLNVLPTIFIQVLVLLII 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00977 348 PANTHER OS03G0796600 PROTEIN 15 286 IPR006502 -
Spst11g00977 348 Pfam PDDEXK-like family of unknown function 179 281 IPR006502 -
Spst11g00977 348 Pfam PDDEXK-like family of unknown function 31 152 IPR006502 -
Spst11g00977 348 NCBIfam uncharacterized plant-specific domain TIGR01615 124 282 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00977 Spst-Chr11 33999602 34000854 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00977 - - gmx:100815222 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00977 11 33999602 34000854 Spst11g00977 11 33999602 34000854 ECH
Spst5g00881 5 8107412 8109188 Spst11g00977 11 33999602 34000854 PCT