Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00848 ATGGCTTCCAAACCTTCCTCCCTCCTTGGACTTCTTCTCATCACCACCATCCTTCTTGCCACTACATGGCAAGCAGTTGCAAGACGCCACATTAAACCAAAGAACTCACACAAAGGGGACAAGAAAGAACCTCAGTTTTTGTTCCCTTCTGATGGTTATATTCCTGGCTTTGGGAGATTAGGGATTCCTCCTTTCTTTGGGTTTACACCTCAAAATCCAAGCACTGGTGGTGTTATTGGAGTAGAGCCAGCACCAGTTTCAGGTGGTGGTAGTGGTGTAGAGCCAGCACCAGTGTCAGGTGGTGGTAGTGGAGTAGAGCCATCTCCAGTTTCAGGTGGTGGTAGTGGAGTAGAGCCAGCACCAGTTTCAGGTGGTGGTTATGTTCCAGGTGGGGATGACACATTTGTCCCAAACCCTGGTTTTGAGGTTCCAAGCCCTAGAAGTGGTGCTGGAGTCCCAGTTCCAGTTCCAGTTCCAGCTAATCCGTGA 489 0.4969 MASKPSSLLGLLLITTILLATTWQAVARRHIKPKNSHKGDKKEPQFLFPSDGYIPGFGRLGIPPFFGFTPQNPSTGGVIGVEPAPVSGGGSGVEPAPVSGGGSGVEPSPVSGGGSGVEPAPVSGGGYVPGGDDTFVPNPGFEVPSPRSGAGVPVPVPVPANP 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00848 162 MobiDBLite consensus disorder prediction 73 162 - -
Spst5g00848 162 PANTHER CELL WALL PROTEIN-RELATED 1 156 IPR034565 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00848 Spst-Chr5 7833457 7833945 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00848 - - pvu:PHAVU_005G106200g 172.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01012 11 34288540 34288959 Spst5g00848 5 7833457 7833945 PCT