Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01012 ATGGCTTCCAAAGCTTCCTTATTCCTTGCACTTGTGGTCATTTCCAATATCCTCATTGCCACAGCAGTTGCTGGAAGCAGCATTGCCAAGAAAACCAACGCACAAGACAAGAAAGAGCCTCAGTTCTTGTTCAAGTCTCATGATAGGGTGTATATTCCAGGCATTGGACCTGTAGCATTTCCTCCTAAATTTCACCTTACACCTCACAATCCATTTACTGGTGGCAATGGAGGAGCTGGAACAGGAGCAGGAGCTGGAACAGGAGCAGGAGCTGGAACAGGATCAGGAACTGGGTCAGGATCAGGATCAACTGGTCGCAGTTATGTTCCAGGCGGTGATGACACTTTTGTCCCAAACCCTGGTTATGAGGTTCCCATTCCTGGCAGTGGTGGCAGTGTTCCAGCACCAGTTCATCCATGA 420 0.4881 MASKASLFLALVVISNILIATAVAGSSIAKKTNAQDKKEPQFLFKSHDRVYIPGIGPVAFPPKFHLTPHNPFTGGNGGAGTGAGAGTGAGAGTGSGTGSGSGSTGRSYVPGGDDTFVPNPGYEVPIPGSGGSVPAPVHP 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01012 139 PANTHER CELL WALL PROTEIN-RELATED 1 138 IPR034565 -
Spst11g01012 139 MobiDBLite consensus disorder prediction 92 108 - -
Spst11g01012 139 MobiDBLite consensus disorder prediction 69 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01012 Spst-Chr11 34288540 34288959 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01012 - - vra:106755985 196.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01012 11 34288540 34288959 Spst5g00848 5 7833457 7833945 PCT