Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00845 ATGGAACCTGCCCTTCTCAGTTCCAATACTAATGCCACCACCTTCTCCAATGGAAACTGCCCAGGTGACTTTGATATCATTACCTGGTTCGAGGACGTGTCCAAGAACGCTGCTTCTGTTCAGACTCAGACACTATGCAGGATTCTGAAGCAGAACTGTGGGGTTGAATATTTGAAGAAATGGTTGGGCGGCTACAATGTCTCAGACATGGATGCTTGTGCGTTGGAATCTCTTTTCACTTCTCTTGTTCCCCTTGCTTCGCATGCAGATTTCGAGCCATATATCCAAAAAATTGCAGATGGAGACACAGCTCCTATACTCACTCAACAACCTATAACCACTCTTTCCTTAAGTTCTGGAACCACAGAGGGGAGGCAGAAGTTTGTACCCTTTACCCGCCATAGTGCTCAGACGACCCTTCAAACTTTCACTTTAGCAGCAGCCTATAGATCAAGGGTTTATCCCACAAGGGAAGGAGGCAGGATTCTTGAATTCATATACAGCAGCAGCCAGTTCAAAACAAAAGGAGGCTTAACAGTTGGAACAGCCACAACACACTACTATGCAAGTGAGGAATTCAAAACCAAACAAAAGGAAACAAAGGCATTCACTTGCAGTCCATACGAAGTTATATCCGCAGAGGACCACGAACAATCCACGTACTGTCACCTCCTTCTTGGTCTCTTCCTCTCTGATCACGTAGAGTTTATTTCCGCGGCTTTTGTCTATGGCATAGTGCAAGCTTTTTGCACTTTCGAAGAGGTTTGGAAAGACCTTTGCAATGACGTAAGAGATGGCACTTTGAGCTCAAGAATAAAGTTACCCAAAATGAGAGAGGCTGTTTTGGGTATCATCTCTTCGAACCCCTCTTTGGCCTCAAAACTAGAAGCCGCTTGCTTGGAGCTAGAAGTGGTGGATTGGTTTGGTTTGGTTCCCAAACTTTGGCCAAATGCCAAGTACATTTGTTCCATAATGACAGGTTCTATGCAACCTTACTTGAAAAAGCTTAGGCATTATGCAAATGGTGTGCCACTAATAAGTGGTGACTATGGTTCAACTGAGAGCTGGATAGGGGTTAATGTGGATCCTAGTTTGGCTCCAGAGAAAGTAACCTTTGCTGTAGTGCCCACGTTCTCTTACTTTGAGTTCATACCACTTTATAGACAGAAACAAGATTGCAGCTTGGTAGCTGATCATGATTTCATGGAAGATGAGCCAATCCCACTTTCCCAAGTTAAAGTTGGCCAAGAGTACGAAATAGTGCTCACAACTTTTACTGGGTTGTATAGGTGCAGACTAGGAGATGTGGTGGAAGTGGGAGGTTTTCACAATGGGACCCCGAAGTTGAATTTTTTATGCAGAAGAAAACTGATTCTAACAGTGAATATAGACAAGAACACAGAGAGAGACCTTCAAATGGTGGTAGAGAAAGGGTCACAGCTGCTAAACAAGGTCAAAGCTGAGGTTGTTGATTTTACAAGCTATGCAGATGTCTCAAACGAACCAGGTTGTTACGTCATTTTCTGGGAGGTGAAAGGTAAGGCTGATGATAAGGTACTTGAGACATGCTGCAGGGAAATGGATGCAGCTTTTGTCGACCATGGCTATGTGGTTGCAAGGAAAACCAGTTCAATAGGGCCTTTGAGACTTTGCATTGTGGAGAGAGGAACTTTCAAAAAGATTTTGGATTATTTCGTGGAGATTGGGGCAGCACTGGGCCAGTTCAAGACCCCTAGGTGCACTAACAACCCTGTCCTCCTCAAGATTCTTAATGCATGCACCATTAAAACATTTCACAGCACTGCTTATAGTTCAATCCACTCATGA 1827 0.4406 MEPALLSSNTNATTFSNGNCPGDFDIITWFEDVSKNAASVQTQTLCRILKQNCGVEYLKKWLGGYNVSDMDACALESLFTSLVPLASHADFEPYIQKIADGDTAPILTQQPITTLSLSSGTTEGRQKFVPFTRHSAQTTLQTFTLAAAYRSRVYPTREGGRILEFIYSSSQFKTKGGLTVGTATTHYYASEEFKTKQKETKAFTCSPYEVISAEDHEQSTYCHLLLGLFLSDHVEFISAAFVYGIVQAFCTFEEVWKDLCNDVRDGTLSSRIKLPKMREAVLGIISSNPSLASKLEAACLELEVVDWFGLVPKLWPNAKYICSIMTGSMQPYLKKLRHYANGVPLISGDYGSTESWIGVNVDPSLAPEKVTFAVVPTFSYFEFIPLYRQKQDCSLVADHDFMEDEPIPLSQVKVGQEYEIVLTTFTGLYRCRLGDVVEVGGFHNGTPKLNFLCRRKLILTVNIDKNTERDLQMVVEKGSQLLNKVKAEVVDFTSYADVSNEPGCYVIFWEVKGKADDKVLETCCREMDAAFVDHGYVVARKTSSIGPLRLCIVERGTFKKILDYFVEIGAALGQFKTPRCTNNPVLLKILNACTIKTFHSTAYSSIHS 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00845 608 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 26 603 IPR004993 -
Spst5g00845 608 Pfam GH3 auxin-responsive promoter 29 583 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00845 Spst-Chr5 7779664 7783528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00845 25 601 EF-hand Containing Proteins AT1G23160 34.291 2.16e-117 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00845 K14487 - gmx:100814683 1095.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00845 5 7779664 7783528 Spst5g00845 5 7779664 7783528 ECH
Spst5g00845 5 7779664 7783528 Spst11g01015 11 34337099 34338189 PCT