Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00835 ATGAAAACGCCGAACGGTTCACCGGTTTCTAGTCCGTCTCCGAAACCTCGTCATCTTCGTAACCGCGAATTAAGTTCACGGTTTCTCCCTTCACCTCCGAACTCAACCACACACTCCGCTGAATGCCACTCCCCCGTCCGCCGCAAATCCCCGAGCCCAAACCGGCGCCACGCCGTCACCGAGGACCCGGGTTCCACGCGCCACCAACTATGGCCTTCCTCTGCGGCGGCGAAGAGAAACTCCGGCACTCTCGCCGACCACATCACCGAAGACAGAATCATAGAGCGCACAACTAATACACCCATCATCACGGGTGGCTCCGCGAGACACGTCGCGAAATTAGTAACACGCTCAGAATCACCATTTTCTAAGAAACCCATTTACAGCAACATTGCTCCGGGAAGATTGTCACTGGATGAGAACGCTAAGTCCTTCTCTTCGCGGAGACACTCTTGTTCTTCTAGAAACTCTCTCGATTCGGAACCTGACGCGGGAAAAACAACGCCGAGAAAACCTGACATGGAGGTTGAACCTTCGAATGAAGCAACAACAACGTTGAGAAAGCCTCGAAGGGGAACTTCGGATTCCAATATAGCGAACTTGAACGGAAACTCCCCTGTTACGAAACGGTTCACGTTGAAAACGGCTATTAGAAGGGCTAATTCGCTTGCTGGATCGTACAAGAGTTCGAAGTCTTCGTGGGCTTTGTCTCCTGGGAGAGCGGAGTCGCCGGCTATGTCGGTTGAGAGCATGGATAAACCGATGTCGTTTTCGGGCTTCCAGCACCGTGCTACTAGTCCTACTAACAAGGTGAAAGGCGTAGAGAAGTTTCTCAGCATGGGTTTTGATCTCTTTAAGAGTAAGAAAAATGGTGGGCTTGGGTCTCTTTCGCCCATTGGTTTTGCTGTTAACTCGGAGGTTGTTCATAAGCTTCGTTTGTTTGATAATCTGTTGATTCAATGGCGGTTTGCAAATGCTAGAGCCCAGGTTGTGAATGGAAACATTTTTCACAAGGCTGAGAGCAATTTGATATGTGTTTGGGATGCTCTCACAAAGTTACAGCGTTCTGTTCTGAAAAAGAAGATACAATTTATCAGAGAAAAACTTGAAATGAAGATTGCTTTTGTTCTGTATTCTCAGATGAAGTTATTGGAAACTTGGGTAGGTATGGAAAGACAACACTCACAAGCAATTACTGCCATCAAAGAGTGTTTGCATTCGGTTGTTTGCAGAGTTCCTCTTTTGGAAGGTGCTAGGGTGAATATGCAATCAACATCTATTGCTCTACGCCATGCAACTGATCTCACAGCTTCCATCAAGTCAATTTTAACTACTTTTTCATCTTCTGAGGTTGATAAGATTGCTACAATGCTATCAGAATTAGCAAAAGTTGTAGCACAAGAGAAACAGCTCTTAGAAGAGTTCTATGATCTTTTCCAGGCCATATATGTCTTTGAGGTTCAAGAAAGAAGTGTGAAGTGCAATCTTGTTCAACTAGAAGGTTGGCAACAAAAATATCAACTGCAACAATTACTACCAGAGATTACTTCATGGATCTCTATTTAG 1566 0.4579 MKTPNGSPVSSPSPKPRHLRNRELSSRFLPSPPNSTTHSAECHSPVRRKSPSPNRRHAVTEDPGSTRHQLWPSSAAAKRNSGTLADHITEDRIIERTTNTPIITGGSARHVAKLVTRSESPFSKKPIYSNIAPGRLSLDENAKSFSSRRHSCSSRNSLDSEPDAGKTTPRKPDMEVEPSNEATTTLRKPRRGTSDSNIANLNGNSPVTKRFTLKTAIRRANSLAGSYKSSKSSWALSPGRAESPAMSVESMDKPMSFSGFQHRATSPTNKVKGVEKFLSMGFDLFKSKKNGGLGSLSPIGFAVNSEVVHKLRLFDNLLIQWRFANARAQVVNGNIFHKAESNLICVWDALTKLQRSVLKKKIQFIREKLEMKIAFVLYSQMKLLETWVGMERQHSQAITAIKECLHSVVCRVPLLEGARVNMQSTSIALRHATDLTASIKSILTTFSSSEVDKIATMLSELAKVVAQEKQLLEEFYDLFQAIYVFEVQERSVKCNLVQLEGWQQKYQLQQLLPEITSWISI 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00835 521 PANTHER AUGMIN FAMILY MEMBER 22 500 - -
Spst5g00835 521 MobiDBLite consensus disorder prediction 1 84 - -
Spst5g00835 521 MobiDBLite consensus disorder prediction 27 41 - -
Spst5g00835 521 MobiDBLite consensus disorder prediction 142 205 - -
Spst5g00835 521 MobiDBLite consensus disorder prediction 178 205 - -
Spst5g00835 521 MobiDBLite consensus disorder prediction 66 80 - -
Spst5g00835 521 MobiDBLite consensus disorder prediction 147 163 - -
Spst5g00835 521 Pfam QWRF family 180 473 IPR007573 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00835 Spst-Chr5 7671850 7674032 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00835 - - vra:106770120 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00835 5 7671850 7674032 Spst5g00835 5 7671850 7674032 ECH
Spst5g00835 5 7671850 7674032 Spst11g01032 11 34495166 34499138 PCT