Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01032 ATGAAAAGCGATTCCAATGACTCTGTCTCCCCTTATTCTCCCAAACGCAGAACCCGTTTCGTAAGTTCCCGGTTCATGTCACCAAACTCGACCGCTTCACCAGATTCATCCTCTCCGCTCCGCCGGTTCAACCGCCCCACGAGAAAAGACTCTACCACTCTCGCTTATCATATTGGCAATGAGAGGCTCAAAGAAAGGGAAGAAAACCACCAACATCACAATCAGAAACCCACAAACAGAACAGACTCTGTTTTCTCTGCTCTCACAAAACAGAGGAGCTGTAGGGAGTACAGAAACAACAACAATTTCTTAGAAGAAAACGATCAAGATCAAGATCAAGACGTTGCTGGTAGGTCCACGAAGAATGATTTCTCCGTAAAATCTTCTTCTCGGGTGGTGAAGAAAACAATTTCTCATCTTGATCCTGGGAGACTCTCTCTTGACGAGAATACCTTTAAGGGAAATTTTCATTGCGATAAGAACCCAATTGACTCGGAATCCGAAAATACGAGTTTGGATTCTGTTTCCCTGCAAAGAACATTCAGTTCGAGGAAATTGGGTAGAGATGTTCCTTCTAAGTACATGGCAGTGTGTGGCAGTGGGAGAAGAGGAGAAGCTTCTGATTCAGACCCTTTGTCTTGTGATGATTCATGGATGATGAAGAAGTTTATGACACAAAAAACGGGGAAGAAGGCTAATTCCCTTATTGGGTACATGAGTTCCAAGTCTCAGTGGGCATTGTCCCCTGGGAGATCAGGATCACCACCTTTGTCTTTAGAAAGCAAGGATAAGCAATTGTCTTTTTCGAGCATGAGGCCTCCACAAAAGAGAGTGGAGAAAATTCTGAGCATGGGTTTTGATTTCTTTAGGACTAAAAAATCTTCTTCTATCAATGAAGTCGTTCATCAGTTGCGTCTGCTTCAAAACCGATTGATCCAATGGCGGTTCGCAAATGCTAGAGCTCAAGCTGTAAATCACTCCATATCTCTTCAGACTGAGAGCAATTTAATAAATGTTTTGGATGGTCTGACCAAGTTGCGGCATTCAGTAATGCGAAAGAAGATCGAGCTCGAAAGAGAAAAACTTAAGATGAAGCTAAATTTTCTACTGCATTCTCAAATGAAGATGTTGGAATCGTGGGGAAGTATGGAAAGGCAGCACCTAGCTGCAGTTACCACAATGAAAGAATGTTTACATTCTGTTATATGCAGAGTTCCTCTCTCGGAAGGGGCAAAGGTGGATATACAATTGGCATCCATTGCTCAGCGGTATGCATCTGATCTAACAGATTCCATAGAGTCAGTGTTATCTAGTTTTTCACCCTTGGCTAATAAGACATCTGAGTTGATATCAAATTTAGCAAGAATTGTTGCCCAAGAGAAATTGCTCTTGCAGGAACTCAATGATGTGTTCCACGACATGTGTGTCCTTGAGATGGAAGCTGAAGGAAAGGAGCCTAGTATGCAGTCTCATTCAACTCCAATCTTGAAAATAAAAATACTAGAAACTGCAATTACTGCCAAAGATCCCTTGAATCAGAAACCACATTCTCTTCCAGGAACATGGAATTGGAGAGAATTGGGTAGGGTGGTTTCATTCAAGTACATGGCAAGAAGCGAGGGAGATTCTGATGGTTCATGGATGGTGAAGACGCACAAAGCAACAAAGAAGACTAATAATTTTGTTCTTGGGTATGTGGGTTCCAAGTATCACTGGGCATTGTCTCATGGACACATTATCCTGAGGCCACCTCAACCCATATGTTGA 1767 0.425 MKSDSNDSVSPYSPKRRTRFVSSRFMSPNSTASPDSSSPLRRFNRPTRKDSTTLAYHIGNERLKEREENHQHHNQKPTNRTDSVFSALTKQRSCREYRNNNNFLEENDQDQDQDVAGRSTKNDFSVKSSSRVVKKTISHLDPGRLSLDENTFKGNFHCDKNPIDSESENTSLDSVSLQRTFSSRKLGRDVPSKYMAVCGSGRRGEASDSDPLSCDDSWMMKKFMTQKTGKKANSLIGYMSSKSQWALSPGRSGSPPLSLESKDKQLSFSSMRPPQKRVEKILSMGFDFFRTKKSSSINEVVHQLRLLQNRLIQWRFANARAQAVNHSISLQTESNLINVLDGLTKLRHSVMRKKIELEREKLKMKLNFLLHSQMKMLESWGSMERQHLAAVTTMKECLHSVICRVPLSEGAKVDIQLASIAQRYASDLTDSIESVLSSFSPLANKTSELISNLARIVAQEKLLLQELNDVFHDMCVLEMEAEGKEPSMQSHSTPILKIKILETAITAKDPLNQKPHSLPGTWNWRELGRVVSFKYMARSEGDSDGSWMVKTHKATKKTNNFVLGYVGSKYHWALSHGHIILRPPQPIC 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01032 588 MobiDBLite consensus disorder prediction 247 271 - -
Spst11g01032 588 PANTHER AUGMIN FAMILY MEMBER 6 491 - -
Spst11g01032 588 MobiDBLite consensus disorder prediction 1 54 - -
Spst11g01032 588 Pfam QWRF family 185 465 IPR007573 -
Spst11g01032 588 MobiDBLite consensus disorder prediction 99 117 - -
Spst11g01032 588 MobiDBLite consensus disorder prediction 1 41 - -
Spst11g01032 588 MobiDBLite consensus disorder prediction 66 85 - -
Spst11g01032 588 MobiDBLite consensus disorder prediction 98 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01032 Spst-Chr11 34495166 34499138 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01032 - - gmx:102660879 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01032 11 34495166 34499138 Spst11g01032 11 34495166 34499138 ECH
Spst5g00835 5 7671850 7674032 Spst11g01032 11 34495166 34499138 PCT