Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00834 ATGCGGCGAAGAGGGACGGATTTTCGCAGGCCAGTGCGAAGGAAGGTTCCAGATGCGTTGTGGTGGGCATTGTGCTGTGCAGTGATTCTTCTCTTTGTCTATATTCTTAGCAAAGGGAACAGAATTGAGTCCAGACCCGCTTTGTCCAAGAGAACTTACAAGCATGATAAGATTATGGAAGGCCTTAATATTACTGAAGAGATGTTAAACACTAACTCAGTTACGAGACAACTCAATGATCAGATATCTCTGGCAAAAGCTTTTGTTGTAATTGCAAAGGAGAGTAACAATCTCCAATTTGCTTGGGAATTAAGTGCCCAGATCCACAATTCACAGATGCTCCTCTCAAATGCTGCCACTAGGCGTGTTCCTTTGACAACTAGGGAAACAGAAAGGGCTATCCGTGATATGGCATTGTTGTTATACCAAGCCCAGCAGCTCCATTATGATAGTGCAACCATGATCATGAGATTCAAAGCAAAAATTCAAGCCCTCGAGGAACAGATGAATTCTGTTACCGAAAAGAGTTCCAAATATGGGCAAATAGCTGCTGAAGAAGTCCCAAAAAGTCTCTACTGTCTTGGTGTTCGGTTGACAACAGAATGGTTCAGAAACTTTAATTTCCAAAAGAAGCTGAAGGACAAAAGGCAAATGGAGATGAAGCTCAAGGATAACAATCTTTACCACTTTTGTGTTTTCTCGGATAACATTCTTGCGACTTCAGTTGTGGTCAATTCAACTGCAATGAATTCTAAAAATCCCAATATGATCGTTTTCCACCTTGTCACTGATGAAATAAACTATGCAGCGATGAAGGCATGGTTTTCCATGAATGATTTCCATGGGGTGACTGTGGAAGTTCAGAAGTTTGAAGACTTTACATGGTTAAATGCTTCATATGTTCCTGTGCTTAAGCAACTTCAAGACTCGGAAATACAGAGCTACTACTTTTCTGGCAACAGCGATGATGGAAGAACACCTATCAAGTTTCGTAACCCTAAATATTTATCCATGCTTAATCACCTGAGGTTCTACATACCAGAAGTTTTTCCTGCACTTGAGAAGGTGGTGTTCCTGGATGATGATGTTGTGGTTCAGAAGGATCTTTCTGGTCTTTTTTCCATTGATTTGAATGGGAATGTAAATGGAGCTGTTGAAACATGCATGGAGACATTTCACAGATACCATAAATATTTGAACTACTCTCATCCTCTTATTCACACACAATTTGACCCTGATGCTTGTGGATGGGCATTTGGGATGAATGTATTTGATTTGGTTGAATGGAGGAAAAAAAACGTAACCGGCATCTACCACTATTGGCAGGAAAAGAACGTAGACCGGACATTGTGGAAACTTGGTACCTTGCCGCCTGGACTGTTGACATTTTATGGATTAACTGAGCCCCTGGATCCATCATGGCACGTTTTGGGTTTTGGCTACACCAATGTTGATCCTCAGTTGATAGAGAGGGGAGCTGTGCTTCACTTCAATGGAAATTCCAAACCATGGTTGAAGATTGGGATTGAGAAGTACAAGCCCCTATGGGAAAAATATGTTGAATACTCTCATCCTTTACTTCAACGGTGTAACTTCCACTGA 1602 0.4132 MRRRGTDFRRPVRRKVPDALWWALCCAVILLFVYILSKGNRIESRPALSKRTYKHDKIMEGLNITEEMLNTNSVTRQLNDQISLAKAFVVIAKESNNLQFAWELSAQIHNSQMLLSNAATRRVPLTTRETERAIRDMALLLYQAQQLHYDSATMIMRFKAKIQALEEQMNSVTEKSSKYGQIAAEEVPKSLYCLGVRLTTEWFRNFNFQKKLKDKRQMEMKLKDNNLYHFCVFSDNILATSVVVNSTAMNSKNPNMIVFHLVTDEINYAAMKAWFSMNDFHGVTVEVQKFEDFTWLNASYVPVLKQLQDSEIQSYYFSGNSDDGRTPIKFRNPKYLSMLNHLRFYIPEVFPALEKVVFLDDDVVVQKDLSGLFSIDLNGNVNGAVETCMETFHRYHKYLNYSHPLIHTQFDPDACGWAFGMNVFDLVEWRKKNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGFGYTNVDPQLIERGAVLHFNGNSKPWLKIGIEKYKPLWEKYVEYSHPLLQRCNFH 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00834 533 Pfam Glycosyl transferase family 8 235 507 IPR002495 GO:0016757
Spst5g00834 533 Coils Coil 155 175 - -
Spst5g00834 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 228 531 IPR029044 -
Spst5g00834 533 CDD GT8_like_1 228 520 - -
Spst5g00834 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 230 526 IPR029044 -
Spst5g00834 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 64 532 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00834 Spst-Chr5 7667113 7669810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00834 1 533 Glycosyltransferase AT2G20810 79.291 0.0 873
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00834 K13648 - gmx:100792018 1050.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00834 5 7667113 7669810 Spst5g00834 5 7667113 7669810 ECH
Spst5g00834 5 7667113 7669810 Spst11g01033 11 34501718 34504189 PCT