Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01033 ATGAGGCGAAGGAGCGCAGATTTTCGAAGGCCAGGGAGGAGGAGGCTCCAGGATGTGGTGTGGTGGACATCTTGTAGCGTTTTGCTTCTTTTCTTTATTTATATTCTCACCAAAGGCTCCACCAATATTGACTCTACTTACCAATTCTCAAGGAGAACTTTCAGACATGACAGGGTTATTGAAGGCTTCAATGTTACGGACGAGATGTTAAGCCCTGAGTCTGTGACCAGACAAATTAATGATCAAATCTCACTAGCAAAAGCTTTTGTTGTAATTGCCAAAGAAAGTAATAACCACCAATTTGCTTGGGAGTTAACTTCTCAGATCCGCATTTCACAGATTTTTCTCTCAAATGCTGCCACGAGGCGTACTCCATTAACAGTAAAGGAATCAGAATATGCTATTCGTGATATGGCATTATTACTATTTCAGGCCCAGCAGCTCCATTATGACAGTGCGAGCACTATCATGAGACTGAAAGGAAAAATTCAAGCTCTTGAAGAACAGATGAATTCTGCAAGTGAGAAGAGTTCGAAATATGGACAAATAGCTGCTGAAGAAGTCCCAAAGAGCCTATATTGCCTTGGTGTCAGGTTGACATCTAAATGGTTCACGAATCTTAGCTTGCAGAAGAATTTGAAGGACCAAAGACAAGTGGACATGAAATTGAAGGATAATGATCTTTACCACTTCTGTGTCTTTTCGGATAACATCCTAGCTACCTCAGTTGTGATCAATTCTACTTCAATAAATTCCAAAAATCCAGATAAGATTGTTTTCCACCTTGTCACAGATGAAATAAATTATGCTGCAATGAAGGCATGGTTTTCTTTGAACGATTTTCGAGGGGTGACAGTTGAAGTTCAAAGGTTTGAAGACTTCAGTTGGTTAAATGCTTCATATGTTCCCGTGCTTAAGCAGCTTCAAGACTCAGAGATACAGAACTATTACTTCAAAGGCAACAGTGATGAAGGCAAGACTCCCATCAAGTTCAGGAATCCGAAATATCTGTCCATGCTTAACCACCTGAGGTTCTACATCCCGGAAGTTTTTCCTGAGCTGAAGAAGGTGGTGTTCCTGGATGACGATGTTGTGGTTCGGAAGGATCTTTCTGATCTTTTTACTATTGATTTGAATGGCAATGTTAATGGAGCCGTTGAGACATGCATGGAGACATTTCATAGATATCATAAATATTTGAACTACTCACACCCTCTAATAAGACCACATTTTGACCCTGATGCTTGTGGATGGGCATTTGGGATGAATGTGTTTGATTTGGTTCAATGGAGGAATAGGAATGTGACCGGAATCTACCACTATTGGCAAGAAAAAAATGCAGACAGGACATTGTGGAAACTTGGTACCTTGCCACCTGGTTTGTTAACCTTTTATGGGCTTACTGAGCCCTTGGATCCATCATGGCATGTGTTGGGTTTTGGCTACACAAATGTTGATCCTCAGTTGATAGAAAGAGGGGCTGTTCTACACTTCAATGGGAACTCCAAACCGTGGTTGAAGATTGGGATGGAGAAGTACAAGCCTCTGTGGGAAAAATACGTGGATTATTCTCACCCTATATTGCAACAGTGTAATTTTCATTGA 1605 0.4093 MRRRSADFRRPGRRRLQDVVWWTSCSVLLLFFIYILTKGSTNIDSTYQFSRRTFRHDRVIEGFNVTDEMLSPESVTRQINDQISLAKAFVVIAKESNNHQFAWELTSQIRISQIFLSNAATRRTPLTVKESEYAIRDMALLLFQAQQLHYDSASTIMRLKGKIQALEEQMNSASEKSSKYGQIAAEEVPKSLYCLGVRLTSKWFTNLSLQKNLKDQRQVDMKLKDNDLYHFCVFSDNILATSVVINSTSINSKNPDKIVFHLVTDEINYAAMKAWFSLNDFRGVTVEVQRFEDFSWLNASYVPVLKQLQDSEIQNYYFKGNSDEGKTPIKFRNPKYLSMLNHLRFYIPEVFPELKKVVFLDDDVVVRKDLSDLFTIDLNGNVNGAVETCMETFHRYHKYLNYSHPLIRPHFDPDACGWAFGMNVFDLVQWRNRNVTGIYHYWQEKNADRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGFGYTNVDPQLIERGAVLHFNGNSKPWLKIGMEKYKPLWEKYVDYSHPILQQCNFH 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01033 534 SUPERFAMILY Nucleotide-diphospho-sugar transferases 229 532 IPR029044 -
Spst11g01033 534 Coils Coil 156 176 - -
Spst11g01033 534 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 230 529 IPR029044 -
Spst11g01033 534 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 68 533 IPR029993 GO:0047262
Spst11g01033 534 CDD GT8_like_1 229 522 - -
Spst11g01033 534 Pfam Glycosyl transferase family 8 236 508 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01033 Spst-Chr11 34501718 34504189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01033 1 534 Glycosyltransferase AT2G20810 76.723 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01033 K13648 - gmx:100792018 912.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01033 11 34501718 34504189 Spst11g01033 11 34501718 34504189 ECH
Spst5g00834 5 7667113 7669810 Spst11g01033 11 34501718 34504189 PCT