Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00743 ATGTGCCATCAGATGCGCTCTCTTTCAGTAGACTGTACAACAATTTCTGGTTGGCTGTTCATGATCTCTGTTGGATTCAACGCTGCCGCAAGGGATGTCCTTAGCTATGCCTTCACAGAGGGTGAACAGGTTGCTGCTGCAGTTTCAGATCTTTGCCCACTGCTCGCTCTTGCTATTGTCCTCAATGGCATTCAGCCCGTCTTATCTGGGGTGGCTGTTGGATGTGGATGGCAAGCTTTCGTAGCTTATGTAAATGTGGGTTGTTATTATGGAGTTGGCTTACCATTGGGTTCGGTTCTAGGCTTTTATTTCCAATTTGGTGCCAAGGGAATATGGCTGGGAATGCTAGGTGGCACCACTATGCAAACAATGATTCTATTATGGGTCACATTTAGAACGGACTGGAATAAGGAGGTAGAGGAAGCAGTGAAGAGGTTGAGCAAATGGGAGGACAAGAAGGAGCCAATACTAAACTGA 477 0.4654 MCHQMRSLSVDCTTISGWLFMISVGFNAAARDVLSYAFTEGEQVAAAVSDLCPLLALAIVLNGIQPVLSGVAVGCGWQAFVAYVNVGCYYGVGLPLGSVLGFYFQFGAKGIWLGMLGGTTMQTMILLWVTFRTDWNKEVEEAVKRLSKWEDKKEPILN 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00743 158 Pfam MatE 17 97 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst5g00743 158 Coils Coil 132 152 - -
Spst5g00743 158 PANTHER MULTIDRUG RESISTANCE PROTEIN 28 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00743 Spst-Chr5 6486663 6491108 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00743 K03327 - gmx:100795338 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00743 5 6486663 6491108 Spst5g00743 5 6486663 6491108 ECH
Spst5g00743 5 6486663 6491108 Spst11g01099 11 35335030 35340219 PCT