Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00716 ATGTATCTGACAGGAAGAGGACGTAAAGGGTGTATCTGGAGGAAGGAGTATGAGGACCTTATTCGTAAAATCACGAATGCAGCACAAAATTCGATTCCGCTTGTAGGAGAATTTGCCATCTTCTCAAATACACAGATTGGTAATCATCCAACCATAATTAAGGGGTTTGTGGAATCAGCTACTAAAGCTTTGGAAGGAAATACAGTTGCTCCTAATAATAATTTATGCAAATATGTTGACGCAGCCAAAGAAGTTGTTAGTTGTGAATATGAATACGGCACTGGTTGGGGTAAAGAGGTGGGTTGGGTGTATGGATCAACATCAGAAGATATGCTTACTGGGCTGAAAATCCACACAAAAGGTTGGAGATCTGAACTGTGTTCACCAGACCATATACCCTTCATGGGTTGCTCACCTCAAGATATCCCAAGTCTAATGGGTCAACAAAAGCGATGGGTTTCAGGCTTGCTTGCTATTCTCTTCAGCAACCACTGTCCAATTTTTGGAACCCTATTTGGTAAGCTCCAATTCAGAGAGTGCTTGGGCTATCTTTGGTGCCTCAGTTGGGGCTTAAGACCTGTTCCTGAATTATGCTACACTCTTCTCCCTGCCTATTGCATCATCAACAACTCTACTTTCTTGCCCAAGGAACTTGGACAATGGGCTCCTACCACTTTGTTTGTGGTTTACAATGTAACTAACTACTCTTGTGGAGTATTTGGGAACAGGGTTATCAATTCGAACATGGTGGAACGTTCAAAGAATGGCAAGGATAACCACAACGAGTGCTTGCGATTAGGAATATCTGACACTGTGTTTGAGATAACAAAAAAAGAACAACCATCATCCAATGAGAAGGCTAATGAAAACAATGGTAGATTCATTTTCGACAAGACTCCAATGTTTGTGTCTGGCACAACTATTTTGCTTATTCAACTCACAGCACTGGTTACCAAGTGTTTGGGATGGCAACGACAAGTTGGAAATGGTGATGGATCTGGTGTGGCGGAAGTGCTAAGTTGTTCATATTTGGTTGTGTGCTCCTGGCCATTTTTGAAAGGGTTATTTGGGAAAGGAAAATATGGCATTCCCTTATCCACTAAGGAAGCGAACGATAGTGCAGAAGAAGATAGCTTCTTAGCTGTTAACAGTGTTCGTTTACCATTGCGGACTTCATTTTCTCTCTTCTTTCTCTCTGCAAAGCACAACCCCCATAACATACACTGCAGAGTTCAGTGTGCAGAGTTTGAGAGAGAAATGGGTTCGAATTGTGGTGGCGTTGTGGTGAGGTTTGGTTTGTGGGTGGTGGCGCTGTCCATTGCAGGGTACATAGTGGGTCCCCCTCTCTACTGGCACCTCATTGAACTCCTCAACCATTCTTCTTCTTCTTCTTCTTGCGCTCCTTGCCTCTGTGATTGTTCTTCCCAACCCATCATTTCTATTCCCCAAGCGCTTAGCAACTCTTCTTTTGAAGCTTGTGCAAAGCACAATCCAAAGGTGGATGGAGACACCGAAAAGAATGTAGCGGAGTTACTGTCAGAAGAACTAAATCTCCGGGAAACTGAAGCTTTGAAAAATCAGCATCGTGCTGACATGGCTCTGCTGGAATCTAAGAAGATTGCATCTCAGTATCAAAAAGAAGCAGACAAGTGTAATTCAGGAATGGAGACATGTGAAGAAGCCAGGGAAAAGGCTGAGATGGCCTTATTGGCCCAGAAGAAACTCTCTGCATTGTGGGAACTGAGAGCTCGTCAGAAAGGATGGAAAGAAGGGCTTTCCAAATCTAATACTCACTCTAAAGGGAAAGTACACACTGCTTAG 1821 0.4333 MYLTGRGRKGCIWRKEYEDLIRKITNAAQNSIPLVGEFAIFSNTQIGNHPTIIKGFVESATKALEGNTVAPNNNLCKYVDAAKEVVSCEYEYGTGWGKEVGWVYGSTSEDMLTGLKIHTKGWRSELCSPDHIPFMGCSPQDIPSLMGQQKRWVSGLLAILFSNHCPIFGTLFGKLQFRECLGYLWCLSWGLRPVPELCYTLLPAYCIINNSTFLPKELGQWAPTTLFVVYNVTNYSCGVFGNRVINSNMVERSKNGKDNHNECLRLGISDTVFEITKKEQPSSNEKANENNGRFIFDKTPMFVSGTTILLIQLTALVTKCLGWQRQVGNGDGSGVAEVLSCSYLVVCSWPFLKGLFGKGKYGIPLSTKEANDSAEEDSFLAVNSVRLPLRTSFSLFFLSAKHNPHNIHCRVQCAEFEREMGSNCGGVVVRFGLWVVALSIAGYIVGPPLYWHLIELLNHSSSSSSCAPCLCDCSSQPIISIPQALSNSSFEACAKHNPKVDGDTEKNVAELLSEELNLRETEALKNQHRADMALLESKKIASQYQKEADKCNSGMETCEEAREKAEMALLAQKKLSALWELRARQKGWKEGLSKSNTHSKGKVHTA 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00716 606 PANTHER EXPRESSED PROTEIN 428 598 - -
Spst5g00716 606 Pfam Cellulose synthase 56 359 IPR005150 GO:0016020|GO:0016760|GO:0030244
Spst5g00716 606 Coils Coil 518 538 - -
Spst5g00716 606 Pfam Protein of unknown function (DUF1068) 428 591 IPR010471 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00716 Spst-Chr5 6199475 6206321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00716 54 367 Glycosyltransferase AT2G32540 40.356 1.10e-67 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00716 - - var:108332895 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00716 5 6199475 6206321 Spst5g00716 5 6199475 6206321 ECH
Spst11g01124 11 35567388 35572711 Spst5g00716 5 6199475 6206321 PCT