Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01124 ATGGCTAACCAAGACTCTGTCCCCCTCTATGAGAAACACCGATACAAGCACCCTCATAAAAGGGTAACGGATAGCTTGCTTTTAATCCTTCTCTTGTTGCTGCTTGGCTACCGCGTTATCTCCGTCAACAACTACTCTTACCCTTGGTTTGTTGCCTTCGTGTGTGAATCATGGTTCACCATCTCTTGGTTTTTCACCCTCAGCACTCAATGGAACCCGGCACAAATCAAAACCTACCCAGAACGTCTCTTGCAAAGGAGCGTGCAGGAGCTTCCACCAGTGGATTTGTTTGTGACAACAGCAGACCCTGTGCTTGAACCACCCATCATCACAGTGAACACTGTGCTATCTCTGTTGGCACTTGATTACCCAACTCACAAGCTTGCTTGTTATGTTTCTGACGATGGTTGCTCCCCTCATACCTTCTTCGCTCTTCAAGAAGCCTCTAAATTTGCAAAGTTTTGGGTACCATTCTGTAAAAAGTACGATGTGCAAGTTAGAGCTCCATTCAGATACTTCTCTGACAAATCTGAGGTCTCAACGTCCAACAACACACCTCAATTTAAACAAGAAAGGTTACAAATGAAGGATATGTATGACGATCTTAGCAGAAAAATAGAATTGGATGCATCCCAAAAACCAAATCCAACTCGTCAAGACTTTGCTGTTTTCTCAAACACTCACACCACAAATCATCCATCCATAATAAAGGTTATATGGGAGAACAAAGGCCTTGAAGATGAGTTGCCGCATTTGATCTACATATCCAGAGAGAAGAGGCCAAAACATTCTCATCATTTCAAAGCTGGTGCCATGAATGTATTGACAAGAGTCTCGGGGTTGATAACCAATGCTCCCTTTATGCTGAACGTGGACTGTGACATGATTGTAAATAATCCAAAGATTGTTCATCATGCACTGTGCATTTTACTAGATCCCGAAGGACAAAAAGAAGTTGCATTTGCTCAATTTCCCCAACAATTCCATGCTACGTTGAAGGACGATCCTTTTGGAAACCAGATGGCAATTTTGATTAAGTACTTGGCAGCTGGATTAGCTGGTCTGCAAGGTCCTTTCTACGGGGGAACAAACTGCTTCCATAGAAGAAAAGTTATTTATGGTCTTTCTCCAGATAACGTCAAAAAGGCAAAAGTTTCAGGAAAGAGCATATCAGAGGAGGAATTAAAACAAAAATTTGGAGCTTCTAAGGAGATGATGAAATCAGCTGCTTGTGCTTTAGAAGGAAGAACATATTCGCCAAATGATATTAATATTGCAAATGCTATTGAAGTGGCAAACGATGTTTCTGGTTATGGATATGAATATGGCACTGGATGGGGAAAACAGGTGGGTTGGATATATGGATCACTAACAGAGGACGTGCTCACTGGGCTGACAATACATGGAAAAGGGTGGAGATCAGAATTGTGTACACCAGAGCCCTTAGGCTTCACAGGCTTTGCTCCAGGTGGAGGCCCAACATCAATGGCCCAACAAAAGAGATGGGCCACAGGATTGCTGGACATCTTTTTAAGCAAGCACTGTCCAATTATCGCCACCCTTTTTCACAAGCTTACTTTGAGGCAGTGCATAGCATACATGTGGATTCTCAATTGGGGTGTCAGGCCAGTCTTTGAAGTTTCTTATGCATGTCTCCTTGCATACTGCATCATCACCAACTCCAATTTCTTGCCACGGGACCGTGGCATATGTATTCCTGTTGCTTTTCTTGTAATTTACAAGATATACACCGCATCAGAATATTTAGCAGAAGGGTTATCAATTCGAGCATGGTGGAATAATCAGAGGATGTCAAGAATAACACCAATGAATGCTGGGTTTTGTGCTTTTGTTATTGTCCTACTTAAGAGGCTAAGAATTTCTGAAACTGTATTTGACATAACGAAGAAAGACTTACCCCCAACAAATGATGTTGGAGATGATGAGGATGTTGGCAGGTACACCTTCGATGAATCCCTGGTTTTCTTGCCAGGCACTACCATTTTATTGTTGCAATTGACAGCAATAATCATCAAGTTATTAGGGTTGCAACCACTAGTGTCAGTTGAAGGCAAGAATGGGTGTGGCATTGGTGAGATTTTTTGTGCTGTTTATTTGATAATTTGCTATTGGCCATTTCTGAGAGGATTATTTGAGACAGGAAAGTATGGGATTCCTTTCTCTACAATATGCAAATCAGCTATCTTAATTTGTCTATTTCTAAATCTATGCAAAATAATTATATCTTCTTGA 2253 0.4146 MANQDSVPLYEKHRYKHPHKRVTDSLLLILLLLLLGYRVISVNNYSYPWFVAFVCESWFTISWFFTLSTQWNPAQIKTYPERLLQRSVQELPPVDLFVTTADPVLEPPIITVNTVLSLLALDYPTHKLACYVSDDGCSPHTFFALQEASKFAKFWVPFCKKYDVQVRAPFRYFSDKSEVSTSNNTPQFKQERLQMKDMYDDLSRKIELDASQKPNPTRQDFAVFSNTHTTNHPSIIKVIWENKGLEDELPHLIYISREKRPKHSHHFKAGAMNVLTRVSGLITNAPFMLNVDCDMIVNNPKIVHHALCILLDPEGQKEVAFAQFPQQFHATLKDDPFGNQMAILIKYLAAGLAGLQGPFYGGTNCFHRRKVIYGLSPDNVKKAKVSGKSISEEELKQKFGASKEMMKSAACALEGRTYSPNDINIANAIEVANDVSGYGYEYGTGWGKQVGWIYGSLTEDVLTGLTIHGKGWRSELCTPEPLGFTGFAPGGGPTSMAQQKRWATGLLDIFLSKHCPIIATLFHKLTLRQCIAYMWILNWGVRPVFEVSYACLLAYCIITNSNFLPRDRGICIPVAFLVIYKIYTASEYLAEGLSIRAWWNNQRMSRITPMNAGFCAFVIVLLKRLRISETVFDITKKDLPPTNDVGDDEDVGRYTFDESLVFLPGTTILLLQLTAIIIKLLGLQPLVSVEGKNGCGIGEIFCAVYLIICYWPFLRGLFETGKYGIPFSTICKSAILICLFLNLCKIIISS 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01124 750 SUPERFAMILY Nucleotide-diphospho-sugar transferases 108 515 IPR029044 -
Spst11g01124 750 Pfam Cellulose synthase 389 748 IPR005150 GO:0016020|GO:0016760|GO:0030244
Spst11g01124 750 Pfam Cellulose synthase 94 384 IPR005150 GO:0016020|GO:0016760|GO:0030244
Spst11g01124 750 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 214 380 IPR029044 -
Spst11g01124 750 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 8 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01124 Spst-Chr11 35567388 35572711 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01124 1 741 Glycosyltransferase AT2G32530 44.909 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01124 - - gmx:100500469 1218.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01124 11 35567388 35572711 Spst11g01124 11 35567388 35572711 ECH
Spst11g01124 11 35567388 35572711 Spst5g00716 5 6199475 6206321 PCT