Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00713 ATGTCCGCTCGTATCCAGTCTCCGACGAGTGCCTTCTTCGTGGGGTCCAACGACGACCAGCTCGAACGTGCCCAGGCCCGTGCAGCCCGCGCGGCTACCATTCGCCGCAAGTCCCTTGCCGCCAATTTCCACTTGCAACCGCCCAGTTCTCTTCCCTGTCTCAACAAGCACCAGATTCTCGACTTGTTCCACAACTGCATAAAGCTCGCTTCCGAAAATAAAATTAATCAGAAAAACACGTGGGAGTTGGATTTGATCGATCACCTCACTGATATTATTAGGGTTGAAGAAGGGAATCACATGGAGACTAATTTTCAAATAGCAAGCTGTACTCTTGAAGCTGGAGTCAAAATATATTCCTTGAGGGTGGATTCAGTGCATTCCGATGCATATAAAGTCCTTGCTGGAATGAGTAGAGCCGGCCAAGAAACTGTGGAAGTGTCAAAGTGTCCAGACGCTACTTTAGGGAGTGTTAATGCAGAAAATGGACAGGCAAGCACGAAGGAAGTTGACAAAAAGTTGTTGTTTTTGTCAACATTGGAATCATCTTTTGAGGTTCTTAATGTAAAGAGGTTTGAAGTTGCATTTGCTGTGGATCCACTCTATCACCAGACGTCAGCACAATTTGATGAAGGTGGAGCCAAGGGCCTTTTGATGAATAATCTTGGTGTATATGGTAAATGTCGGGTGCTCTTTGACTCACAAGAAGTGCCAGGGAAGTGCATAATAAGTCAAAATGAACATGATATTTCAGATACAATTGATCTTTCTTTCGCCAGAGATAGTGTTGAACAGATGATATTAAGTATGCATACGAAGGATGAAATCTCTCCAACTCTCAGGATGATAGTAAATCAATTTGATGAAAATTATAGAAGGCCTTTTGATTTTCAAACTTCTGGTGAGAAATCGGCTGAGGAGTTCGATGCAGATATTGGTTGTGAAGTTGTCAACGGAAAAGAAGGAGATGATAACTCTTCAACTTGGAGTTATGATCAAGATAGCCAAACATTTGCTGCTGAATGGGGCTCTGGTGAAACAGACCCAAGTTTTCCAAGTTACCATGAGGAAAAAGAACCATTTCATTCCCAAGATCCTCATATGGATGACATATTTGAGAATGTTGTTGGATATTTATTTTTGAGTCTGGGTTTTAGGTCAAAGAAGAATTCATGGGCAGGCCTTGATCATTGGAAGCATAAAAATATTGAAGGTTCAAAGTCAAAGGTTCATTGTACTTCCGAGGATATCCAGAAAACCAGGAAGCCAAGGACAACGAGACAGGTCAAAGTTGATTTAGAATTCACAAGTTTTCTGGAGAAAAAAATACCAGATATCTTTTCTCCTCCCAAGAATCCCAAATCTTTACTGCTCTCGAAAAGTATATCACCTTGCATTACAAAAGATCCAGAGGATTGCCACTACGAACCAGAGGATCTTGTCAAGTTTTTTCTTGTTCCTTATGTAAAATGTATTGGGAGAAGAACGAGAAGGCTATCAGATGTCTCAGGAGAACAATGTAATGACAACGAATCATTCCCTTCCTGGGGTAATGGAAGTGTTTGGGATGGTGGTGTCACTGATGTACATAATGACATGGATGACTCTAGCACACTTATTTCCCAGCCTCGTCAGATCAATAAAATTGAAGTCCAGTATGACAAAACATCCAAACAAGTAAATGTGGAGGCTCTGAAAATAACACTTTGGGACCGAATTCAAGAATCTATTCAACTTCCATTTCAGGGTCAAAAAGAAATGGTATCTTTCAGGCATATATTGGCAAACTTTCCTAGTAAAAGCAATGCTGCTGCGACTATCAGTGACATATCTCCACATTTGTGTTTCATATGCCTATTACATTTGGCTAATGAGAAGGGGTTAAGCATTCAAAGTTGCCCCACCTTGGATGATCTTGGCGTATGCCTACCTGATGATGGCCACTAA 1947 0.414 MSARIQSPTSAFFVGSNDDQLERAQARAARAATIRRKSLAANFHLQPPSSLPCLNKHQILDLFHNCIKLASENKINQKNTWELDLIDHLTDIIRVEEGNHMETNFQIASCTLEAGVKIYSLRVDSVHSDAYKVLAGMSRAGQETVEVSKCPDATLGSVNAENGQASTKEVDKKLLFLSTLESSFEVLNVKRFEVAFAVDPLYHQTSAQFDEGGAKGLLMNNLGVYGKCRVLFDSQEVPGKCIISQNEHDISDTIDLSFARDSVEQMILSMHTKDEISPTLRMIVNQFDENYRRPFDFQTSGEKSAEEFDADIGCEVVNGKEGDDNSSTWSYDQDSQTFAAEWGSGETDPSFPSYHEEKEPFHSQDPHMDDIFENVVGYLFLSLGFRSKKNSWAGLDHWKHKNIEGSKSKVHCTSEDIQKTRKPRTTRQVKVDLEFTSFLEKKIPDIFSPPKNPKSLLLSKSISPCITKDPEDCHYEPEDLVKFFLVPYVKCIGRRTRRLSDVSGEQCNDNESFPSWGNGSVWDGGVTDVHNDMDDSSTLISQPRQINKIEVQYDKTSKQVNVEALKITLWDRIQESIQLPFQGQKEMVSFRHILANFPSKSNAAATISDISPHLCFICLLHLANEKGLSIQSCPTLDDLGVCLPDDGH 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00713 648 PIRSF Condensin_H 1 262 IPR022816 GO:0000796|GO:0007076
Spst5g00713 648 PIRSF Condensin_H 527 646 IPR022816 GO:0000796|GO:0007076
Spst5g00713 648 PIRSF Condensin_H 255 538 IPR022816 GO:0000796|GO:0007076
Spst5g00713 648 Pfam Condensin complex subunit 2 529 641 IPR022816 GO:0000796|GO:0007076
Spst5g00713 648 Pfam Condensin complex subunit 2 14 496 IPR022816 GO:0000796|GO:0007076
Spst5g00713 648 PANTHER CONDENSIN COMPLEX SUBUNIT 2 7 644 IPR022816 GO:0000796|GO:0007076
Spst5g00713 648 MobiDBLite consensus disorder prediction 341 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00713 Spst-Chr5 6180175 6184047 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00713 K06676 - gmx:100777082 976.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00713 5 6180175 6184047 Spst5g00713 5 6180175 6184047 ECH
Spst5g00713 5 6180175 6184047 Spst11g01126 11 35579297 35583363 PCT