Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01126 ATGGCGGAAACCCTAAGCCCTAATCCTGCAGTGGGTCAGAAGCAGAGGTTCCGCATCCAGTCCCCCACTAGCCCCTTCGTCTTGGGCTCCAACAACGACCAGCTCGAACGCGCCCAGGCACGCGCTGCCCGAGCCGCCGCCATCCGCCGCAAGAGCCTCGGCCTCAGCCAACCTCTTCAGGCCAACTCCGATCACTGCCTCAACAAGCAGCAGATCCTCGATTTGTTCCAGAACTGCATCAAACTCGCCAGCGAAAACAAAATTAATCAGAAAAACACATGGGAGTTGAACCTGATCGATCATCTTACTGATATCATCAAGGTCGAACAAGAAGATGACGCGGAGACTAATTTTCAAAAGGCAAGCTGCACTCTTGAGGCCGGAGTCAAAATTTATTCATTACGAGTGGATTCAGTGCATTCTGAGGCATATAAAGTTCTTGGTGGGATGAACAGAGCAGGCCAAGAAGCTGAGCAAGCTTCCTTTGTCGTGGATCCTCTTTATCGCCAGACAACAGCAAAATTTGATGAAGGTGGAGCCAAGGGTCTTTTAATGAATAATCTCGGTATATATGGTGGATGTAGGGTGCTCTTTGATTCACTAGAAGTTCCTGCGAAGTGTATGGCAAGACAAGATCAATCTGATATTTCAGATACTATTGATCTTTCCTTTGTCAAAGATTGTTTCGAGCAGATGGTCTTGGACATGCGTGTGAAGGATGAAATTTCTCCAAGTCTGAGGAATATAGTAAACCTATTTGATGAAAGTAACAGAAGGCCCACTAATGTTCAACTTCACGGCAAGAATTCATCTGAAGGTCTTGATTTTTCTTCTTTTAATAATGAAATTTTTTTTGACAAAGAACATGAGAACAGCACGTCCTGGAGTGACGATCATGATCACCAGACGGTTGTCGCCGATGTAGACTATAATGATGCAGATCCAGGTTTTCCCAGTTACCCGCAGGACAATGATGAGCCATTTCCCTCCCCAGACGCTTATATGGATGATAGATTTGACAACGTTGACGGATATTTGTTTCTGAGTTTGGGTTTTAATTCAAAACAAAACGCATGGGCTGGCCCTGATCATTGGAAGTATCGAAAATCCAAAGTCTCAGAGGTTCATCTTACTTCCGAAGATGGGTCGACCCTGAAGAGTAGGCAGCCAAAGAGTAAGAAGCAAACTGAAGCTGAACTAAATTTCACAAATTCTCTTGAGAAAGAAATGCTAGATACATTTTCTCCTCCCAAGAACCCCAAATTGTTGCTTCTCCCTGAAAGCAGATTGCCTTGCAATACAAAACTTCCTGAGGACTGCCACTATCAGCCAGAGGATCTTGTCAAGTTATTCCTTCTGTCTAATGTGAAGTGTATCGGGAGGAGGGCAAACAGCTTCTCAGATGGATCTAGAGAACAATCCAACGAATATGAATCGTTCCCTTCGTGGGATAATGGAAGTGTTTGTGGGGATGACTCTGGTGACTACGGAGGTGATCTTCAGAGTGACGTGGAGGACTCCAACACTCTTATTAGTCAGCCTCGCCAGGTCAATAAAATTGAAGTCCAGTACGACAAGACTTCCAAACAAGTTGATGTTCATGCACTAAAAATTACTATTTGGGACCATGTTCAAGAATCTGTTAAACTTCCTTTACAGGGTCAAAAGGATACCTTATCTTTCAGGAATATATTGGCCAACTTTCCTAGCGAATGCAATGCTGCTGCAACCATTAGTGACATCTCTCCTCATTTGTGCTTCATATGTCTATTGCATTTGGCAAACGAGAAAGGATTGAGCATTCAAAACTGCCCCAACTTGGATGATCTTACCATACGCCTTCCACATGTTGCGGACTCTATAAAGGGAACAGTTTAG 1878 0.443 MAETLSPNPAVGQKQRFRIQSPTSPFVLGSNNDQLERAQARAARAAAIRRKSLGLSQPLQANSDHCLNKQQILDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKVEQEDDAETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQEAEQASFVVDPLYRQTTAKFDEGGAKGLLMNNLGIYGGCRVLFDSLEVPAKCMARQDQSDISDTIDLSFVKDCFEQMVLDMRVKDEISPSLRNIVNLFDESNRRPTNVQLHGKNSSEGLDFSSFNNEIFFDKEHENSTSWSDDHDHQTVVADVDYNDADPGFPSYPQDNDEPFPSPDAYMDDRFDNVDGYLFLSLGFNSKQNAWAGPDHWKYRKSKVSEVHLTSEDGSTLKSRQPKSKKQTEAELNFTNSLEKEMLDTFSPPKNPKLLLLPESRLPCNTKLPEDCHYQPEDLVKLFLLSNVKCIGRRANSFSDGSREQSNEYESFPSWDNGSVCGDDSGDYGGDLQSDVEDSNTLISQPRQVNKIEVQYDKTSKQVDVHALKITIWDHVQESVKLPLQGQKDTLSFRNILANFPSECNAAATISDISPHLCFICLLHLANEKGLSIQNCPNLDDLTIRLPHVADSIKGTV 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01126 625 MobiDBLite consensus disorder prediction 466 482 - -
Spst11g01126 625 MobiDBLite consensus disorder prediction 378 397 - -
Spst11g01126 625 Pfam Condensin complex subunit 2 161 613 IPR022816 GO:0000796|GO:0007076
Spst11g01126 625 Pfam Condensin complex subunit 2 28 159 IPR022816 GO:0000796|GO:0007076
Spst11g01126 625 MobiDBLite consensus disorder prediction 464 486 - -
Spst11g01126 625 PIRSF Condensin_H 497 616 IPR022816 GO:0000796|GO:0007076
Spst11g01126 625 PIRSF Condensin_H 1 161 IPR022816 GO:0000796|GO:0007076
Spst11g01126 625 PIRSF Condensin_H 155 499 IPR022816 GO:0000796|GO:0007076
Spst11g01126 625 PANTHER CONDENSIN COMPLEX SUBUNIT 2 161 616 IPR022816 GO:0000796|GO:0007076
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01126 Spst-Chr11 35579297 35583363 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01126 K06676 - gmx:100799781 1076.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g01126 11 35579297 35583363 Spst11g01126 11 35579297 35583363 ECH
Spst5g00713 5 6180175 6184047 Spst11g01126 11 35579297 35583363 PCT