Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00680 ATGGTGAATCCAGGGCCACGAGCCATGTTAGTAAACTTCACAAAGATGGTGATAAAACTTGGAAGAGATGACCCCAGAAGAACTATTCACTCTTTTAAGGTCGGATTGGCACTGGTCTTGATCTCTATTTTGCAATATTTTCGTCCCTCCTTCTATGCTTTTGGTGACAACATAATGTGGGCGGTTCTCACCGTCGTTCTTGTCCTAGAATTTTCTGTGGGTGCAACACTTGGAAAAGGTTTAAACAGGGTGTTGGCAACGGGGTTTGCTGGTGCTCTGGGTGTTGCAATCCGTAAAATAGCTAGCTTTTCTGGGGAGAAGGGTAAGGTTGTAATGACTTCAGTCTCTGTGTTTTTCATAGCTGGAACAGTGACATTTATGAGATTTTCCCCGCGACTGAAGGCAAAATATGATTATGGGTTGATTATATTTATATTGACCTTTAGTTTAGTATCTCTTTCGGAAAGTAATGAGAAGGAAGTGTTAAAAGTTGCTCAAGAGAGGTTATTAACGATCGTCATTGGGAGTTGTATAGCTATTATGGTATGTATTTGCATTTGCCCCGTTTGGATTGGGCAGGATCTCCACAATCAAATTGCTTCAAATGTTGAAAAGCTCGCCGACTTTTTAGAAGGATTTGGAGATGAATACTTCAACAATATAGGGAAGACAGCAGAAGTTGAGGGTGATAAGTCATTTCTCCACAGATTTGAAAGTGTCCTCTCTTCAAAATCTAGTGAAGAAACAATGGCTGTTTTGGCAAGATGGGAACCGTGGCATGGCAGGTTCAGATTTCGCCACCCGTGGAAGCAATACTTAAACACTGGGAACCAAATTCGGTTGTGTGCTTACAAAATTAAAGCTCTTAGTGTCTTGCTCCTCCTCTCTGAGCAAGTACGTACAGTATTTCACATTTCTTTTGCAAATTCTCTGGATTTCCTTTGA 945 0.4116 MVNPGPRAMLVNFTKMVIKLGRDDPRRTIHSFKVGLALVLISILQYFRPSFYAFGDNIMWAVLTVVLVLEFSVGATLGKGLNRVLATGFAGALGVAIRKIASFSGEKGKVVMTSVSVFFIAGTVTFMRFSPRLKAKYDYGLIIFILTFSLVSLSESNEKEVLKVAQERLLTIVIGSCIAIMVCICICPVWIGQDLHNQIASNVEKLADFLEGFGDEYFNNIGKTAEVEGDKSFLHRFESVLSSKSSEETMAVLARWEPWHGRFRFRHPWKQYLNTGNQIRLCAYKIKALSVLLLLSEQVRTVFHISFANSLDFL 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00680 314 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 11 298 - -
Spst5g00680 314 Pfam Aluminium activated malate transporter 19 302 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00680 Spst-Chr5 5825603 5827295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00680 19 299 Miscellaneous Gene Families AT2G27240 53.521 7.36e-104 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00680 K25841 - gmx:100786663 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00680 5 5825603 5827295 Spst5g00680 5 5825603 5827295 ECH
Spst5g00680 5 5825603 5827295 Spst11g01153 11 35888843 35891848 PCT