Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01153 ATGTATTATTCTCCAAAGTCTGAATCAGTTGCTTGTTTTCTTTCAAGAGAAATGGCATCTCCAAACACAAACCAGGAGAAAGCAGGGGTGGTTGGTCGAGTATTGGCCATGCCAAAAGTTCTTAAGGAGAAGGTGCTGGGAATTTGTAGGTTAACGAAAGAGATAGCCCAAGATGATCCTAGAAAAGTGATTCATTCACTAAAAGTGGGGCTTGCAATCTCACTGGTTTCTCTTTTCTATTACTATCAACCACTGTATGAGAATTTTGGTCTATCAGCAATGTGGGCTGTGATGACTGTAGTGGTGGTTTTTGAGTACACAGTCGGAGCCACTCTAGGAAAAGGTTTGAATAGGACAATTGCAACATTGGCAGCTGGTGCTCTTGGTGTTGGGGCTCATTACTTTGCCAGCCTTTCTGGAGCAACAGGGGAACCAATACTGATTGGTGCATTTGTCTTTATGCAAGCTGCCATAGCATCATTTATAAGGTTTTTTCCGAAAGTGAAGGCAAGATATGATTATGGGATGCTTATATTCATCTTGACATTCTCTTTGATATCCGTTTCTGGTTTTCGAGAAGTTGAAGTGTTGGAAATGGCACACAAGAGGCTTTCGACCATATTTATAGGGGGTTCAGCTTGTGTGATGATTTCCATTTTTGTTTGCCCTGTGTGGGCTGGTGAAGAGTTCCACTATTCCATTGCTCACAAGTTGGAAATACTTGGCGATTTCTTGGAAGGTTTTGTACGTGAATACTTCAAGATATCACAAGAAGGAGAATCTGAAGACAAATCGTTTATAGAAGGTTATAAAAAGGTTCTCAATTCTAAAAGTATTGATGACTCTTTGGCCAATTTTGCAAAATGGGAGCCAGGTCATGGCAAGTTTAGATTTCGTCATCCTTGGGACCTATACCTCAATATTGGTGCTCTTGCTCGCCAATGTGCATATCGAATGGAAGCACTAGATGCACACATCAATTCTGATATCAAAGGGTCCCAGGAATTTCGTTCCACCATCCAAGAGTTGTGCTTAGATATGAGTTTGGAATCTAGCAAAGCCTTTAAGGAACTAGGATCATCGATTAGAACAATGAGTAGGCCATCTTCTTCAGACACACATGTTGCGAACGCAAAAGCTGCAGTGAAGAGCCTCAAGTCATTGCTCCAATCATGTTCATGGAAAGAAGCTGACCTCTTATCACTTGTACCAGCTGCAACAGTGGCTTCACTACTGATTGATATTGTGGAAATCACAGAGAAAATAGCAGATTCGGTGAATAACCTCGCCACCCTCACAGATTTTGAGGTTGTAGATACAGATAAATCCCCTAAAGTACCATCACAATCTTCACACTGTGAATGTGATGAACCGGGTCCCAAAACTGATAATCTCCAACTCGTTATTCTAATTGAGGAGTCAGCACGAGCTGTGTCAGATAGTGAAAAATCAAACGTAGTTTGA 1464 0.4139 MYYSPKSESVACFLSREMASPNTNQEKAGVVGRVLAMPKVLKEKVLGICRLTKEIAQDDPRKVIHSLKVGLAISLVSLFYYYQPLYENFGLSAMWAVMTVVVVFEYTVGATLGKGLNRTIATLAAGALGVGAHYFASLSGATGEPILIGAFVFMQAAIASFIRFFPKVKARYDYGMLIFILTFSLISVSGFREVEVLEMAHKRLSTIFIGGSACVMISIFVCPVWAGEEFHYSIAHKLEILGDFLEGFVREYFKISQEGESEDKSFIEGYKKVLNSKSIDDSLANFAKWEPGHGKFRFRHPWDLYLNIGALARQCAYRMEALDAHINSDIKGSQEFRSTIQELCLDMSLESSKAFKELGSSIRTMSRPSSSDTHVANAKAAVKSLKSLLQSCSWKEADLLSLVPAATVASLLIDIVEITEKIADSVNNLATLTDFEVVDTDKSPKVPSQSSHCECDEPGPKTDNLQLVILIEESARAVSDSEKSNVV 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01153 487 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 39 440 - -
Spst11g01153 487 Pfam Aluminium activated malate transporter 54 430 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01153 Spst-Chr11 35888843 35891848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01153 43 436 Miscellaneous Gene Families AT2G27240 58.647 1.11e-168 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01153 K25841 - gmx:100816113 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00680 5 5825603 5827295 Spst11g01153 11 35888843 35891848 PCT