Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00672 ATGACCAAGGACTGCGGCCACCACGACGAGGAGCGCCGGCAGCTCCTCCGCCGCGTATTCGCGGCCATCCTCGGCTTCATCCTCCTCATCCTCCTTATAATCTTCCTCATCTGGATCATCCTCCGCCCGACCAAACCGCGGTTCGTCCTCCAAGACGCCACCGTCTACGCCTTCAACCTCTCCTCCACCGGCGCCACCCCCTCCCCCACCGTCCCCACACCCAACACCCTCACCCTCACCATGCAGGTCACCCTCTCCGCCTTCAACCCCAACAACCGCATCGGCGTCTACTACACCAAACTCGACGCCTACGCCTCCTACCGCGGTCAGCAAGTCTCCCTCGCCACCGACCTCCCCCCCACCTACCAGGGCCACCGCGACACCGCCGTATGGTCTCCCTTCCTCTACGGCACCGCCGTCCCCGTCTCCCCCTTCATGCTCGAGATTCTCCAGCAGGACAAAACCTCCGGAGGAGTGCTGGTCAACGTCAAAGTCAATGGCAGAGTCAAGTGGAAAGTCGGGACTTGGGTCTCCGGAAGGTACCATATTAACGTGAACTGCCCCGCGTATATCAGGCTCGCCGGCGACGCCGATGACGCCATCGGAGTAGCCGCTCCGGCGGTGAAGTTTCAGCTTTTCCAAAGTTGCATTGTTGATGTTTAG 663 0.6139 MTKDCGHHDEERRQLLRRVFAAILGFILLILLIIFLIWIILRPTKPRFVLQDATVYAFNLSSTGATPSPTVPTPNTLTLTMQVTLSAFNPNNRIGVYYTKLDAYASYRGQQVSLATDLPPTYQGHRDTAVWSPFLYGTAVPVSPFMLEILQQDKTSGGVLVNVKVNGRVKWKVGTWVSGRYHINVNCPAYIRLAGDADDAIGVAAPAVKFQLFQSCIVDV 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00672 220 Pfam Late embryogenesis abundant protein 84 187 IPR004864 -
Spst5g00672 220 PANTHER OS05G0367900 PROTEIN 17 202 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00672 Spst-Chr5 5770401 5771063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00672 13 187 EF-hand Containing Proteins AT5G21130 22.727 3.50e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00672 - - pvu:PHAVU_005G120900g 380.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00672 5 5770401 5771063 Spst5g00672 5 5770401 5771063 ECH
Spst5g00672 5 5770401 5771063 Spst11g01161 11 35953438 35954061 PCT