Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01161 ATGTCCCCCAAGGACTGCGGCCACCACGAATCCTCCCACCGCCGTCTCCTCCGCCTCATCCTTACCGGCGCCGCAGCCTTCATCGTCCTCGTCCTCGTCGTGATCTTCCTCATATGGGTAATCCTCCGCCCCACCAAGCCCCGCTTCACGCTCCAAGACGCCACCCTCTACACGTTCAACCTCTCCTCCCCCATCCCCAACACCCTCTCCCTCACTATGCAGGTCACTCTCTCCGCCCACAACCCCAACGCGCGCATCGGCGTCTACTACCACGCGCTCCGCCTCCACGCCTCCTACCACAGCCAGCAGATCTCACTCTCCACCGCCCTCCCCGACACCTACCAGGGCCACCGCGACTTCACCGTCTGGTCGCCCTTCCTCTACGGTATCGCCGTCCCCGTCGCGCCGTTTGTTCTCACTTCCCTGCAGCAGGACCACGATGCCGGCACCGTTATGGTCAACGTTAAGGTCAACGGGAGAGTCAAGTGGAAGGTCGGAACTTGGGTATCTGGAAGGTACCACATTTATGTTAACTGTCCCGCGTATATTAGCTTCGCCGGAGATCGGAGTAATGCCGTAGGAGTAAAGTTTCGCCTCTTGCAAAGTTGCAGTGTTGATGTGTAG 624 0.5978 MSPKDCGHHESSHRRLLRLILTGAAAFIVLVLVVIFLIWVILRPTKPRFTLQDATLYTFNLSSPIPNTLSLTMQVTLSAHNPNARIGVYYHALRLHASYHSQQISLSTALPDTYQGHRDFTVWSPFLYGIAVPVAPFVLTSLQQDHDAGTVMVNVKVNGRVKWKVGTWVSGRYHIYVNCPAYISFAGDRSNAVGVKFRLLQSCSVDV 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01161 207 Pfam Late embryogenesis abundant protein 76 179 IPR004864 -
Spst11g01161 207 PANTHER OS05G0367900 PROTEIN 19 205 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01161 Spst-Chr11 35953438 35954061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01161 9 179 EF-hand Containing Proteins AT5G21130 22.222 1.01e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01161 - - gmx:100812905 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00672 5 5770401 5771063 Spst11g01161 11 35953438 35954061 PCT