Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00650 ATGACCGAGGTCCTCCTCTCCCCACCCCATTTTGCATCTTCTTCATCACCACCAACAACAAAGACAAGGACAACCTCAACCACAACAACCTCAACCCCTTCTTCCTCTTCATTCTCTCGCAATGCCTTTCTCCGACCACACCTCTCTCTCTTGGCTCTTCTGTTGACCCTTCTCAGGAAATCCTTCCTTCCTCGCAAAACCATCTCCTCTATCATGGACATAGGCTCGCCAACTAACGTGCGCCATGTTGCTCATGTCACCTTTGATAGGTTCAATGGTTTCTTGGGTTTGCCTGTTGAGTTTGAACCTGAAGTCCCCAGAAGGCCTCCTAGTGCTAGTGCATCTGTTTTTGGAGTTTCAACAGAATCCATGCAGTTGTCATATGACACAAGAGGGAACAGTGTACCAACGATTCTTCTGTTGATGCAAAAGCATATGTATGCTCAAGGAGGGTTGCAGGTGGAGGGGATTTTCAGAATTAACGCGGACAATGGTCAAGAGGAACATGTTAGGGATCAACTGAATATGGGAGTGGTCCCAGAAGGCATTGACGTACACTGTTTGGCAGGGCTAATTAAGGCTTGGTTTAGGGAACTTCCTACAGGCATTCTGGATTCATTATCACCGGAGCAGGTCATGCAATGCCAGACTGAGGAGGAGTGTGCTGAACTAGTGAGACATCTACCTCATACTGAAGCTTCACTCTTGGACTGGGCCATCAATCTGATGACTGATGTTGTCCAACACGAACATATTAATAAGATGAATGCACGTAACATTGCCATGGTTTTTGCGCCAAACATGACTCAGATGGCGGACCCTATATCTGCATTGATGTATGCAGTTAAAGTAATGAACTTCTTGAAGACACTCATATTAAGGACACTGAGGGAAAGAAAGGATTCTGAGGTAGAATCTTATCCTAGATTTTATGTAGAACCTTCTGATGGTAATGGAAACCAAAGACTTTTAGAGTCCTTCCAGCAAGATACTCCTGCAGAAAATGAACAGGCTCAGGAAAACTTTGTTTTAGAGAAAATCGCCTTAGAGTTTCCTCCTGAATCAGTCCAAAACAACTCAACTCAAGGAGAAACTTGCAGTTTGACAAACTCTTCTGAGAATCTTGTTAGCAATGAGGAATTGTATTGTGAGTTTCCACCCGTAGGAAACATGGGAAAGGGTAAAGCTGGTCAATCAAATAGATCAAATGCTAGAAAAGAATCCAAAAAGACCAGAGGCAGCAACCTGTGA 1251 0.442 MTEVLLSPPHFASSSSPPTTKTRTTSTTTTSTPSSSSFSRNAFLRPHLSLLALLLTLLRKSFLPRKTISSIMDIGSPTNVRHVAHVTFDRFNGFLGLPVEFEPEVPRRPPSASASVFGVSTESMQLSYDTRGNSVPTILLLMQKHMYAQGGLQVEGIFRINADNGQEEHVRDQLNMGVVPEGIDVHCLAGLIKAWFRELPTGILDSLSPEQVMQCQTEEECAELVRHLPHTEASLLDWAINLMTDVVQHEHINKMNARNIAMVFAPNMTQMADPISALMYAVKVMNFLKTLILRTLRERKDSEVESYPRFYVEPSDGNGNQRLLESFQQDTPAENEQAQENFVLEKIALEFPPESVQNNSTQGETCSLTNSSENLVSNEELYCEFPPVGNMGKGKAGQSNRSNARKESKKTRGSNL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00650 416 FunFam Rho GTPase-activating protein 5 104 297 - -
Spst5g00650 416 ProSiteProfiles Rho GTPase-activating proteins domain profile. 119 300 IPR000198 GO:0007165
Spst5g00650 416 Gene3D Rho GTPase activation protein 107 304 IPR008936 -
Spst5g00650 416 Gene3D CRIB domain 70 104 IPR036936 -
Spst5g00650 416 SMART RhoGAP_3 133 296 IPR000198 GO:0007165
Spst5g00650 416 SUPERFAMILY GTPase activation domain, GAP 114 293 IPR008936 -
Spst5g00650 416 MobiDBLite consensus disorder prediction 386 416 - -
Spst5g00650 416 MobiDBLite consensus disorder prediction 400 416 - -
Spst5g00650 416 CDD CRIB 72 112 - -
Spst5g00650 416 CDD RhoGAP 136 292 - -
Spst5g00650 416 ProSiteProfiles CRIB domain profile. 74 87 IPR000095 -
Spst5g00650 416 PANTHER MKIAA1688 PROTEIN 15 370 IPR044785 GO:0005096
Spst5g00650 416 Pfam RhoGAP domain 136 270 IPR000198 GO:0007165
Spst5g00650 416 SMART PBD_5 74 108 IPR000095 -
Spst5g00650 416 MobiDBLite consensus disorder prediction 1 38 - -
Spst5g00650 416 MobiDBLite consensus disorder prediction 7 38 - -
Spst5g00650 416 Pfam P21-Rho-binding domain 73 100 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00650 Spst-Chr5 5581867 5585539 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00650 - K20642 gmx:100776004 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00650 5 5581867 5585539 Spst11g01188 11 36207233 36210422 PCT