Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00631 ATGGAGATTGGAAGTGTTCTCGACTTTCTTCAAAACAAGACCATTTTAATTCTTGGAGCCACCGGTTTTCTTGCCAAAATTTTTCTGGAGAAGATATTGAGGGCTCAACCCGATGTTAAGAAGATTTTTCTTCTTTTAAGAGCTTCTGATGCCAAATCTGCTACTTATCGCTTGCACAATGAGATCATAGCGAAGGACTTGTTCATCGTGCTAAAGGAAAAACTGGGTGCAAATTTTAAGTCCTTTATTTCTGAAAAAGTGACTCTTGTGCCGGGGGACATTTCCTATGAGGATTTGGGGTTGAAGGATTCCATTCTGAGGGAAGAGATTTGCAATCAGACAGATGTTATTGTCAATTTGGCTGCAACTACGAACTTTGATGAAAGGTACGATATAGCGTTGGGTCTAAACACCTTTGGGGTCAAGCATGTCATGAACTTCGCTAAACAATGCACTAAACTGATAGTTCTTCTTCATGTATCAACAGCTTATGTATGTGGTGAGAGAGGTGGACTCATACTAGAGGACCCTTATCACTTTGGTGAGACACTGAATGGAGAGTCTGGCCTAGACATCGATGCAGAAAGGACAATAGTGTGTAACAAATTGGATGAACTTCGAGAACAAGGGGCCACAGAACGTGAAGTTAAAATTGCCATGAAGAATCTGGGTCTTAGCAGGGCAAAGGTTTATGGATGGCCAAACACATACGTATTTACGAAGGCAGTGGGAGAAATGTTTGTGGAAAAACTCAAAGGAAACCTATCTGTTGTTATTATTCGTCCTGCCATTGTTACAAGCACACTCAAAGAACCTTTTCCTGGTTGGGCTGAGGGTGTCAGAACCATTGACAGTTTAGCTGTTACTTATGGACAAGGAAAGTTAACATGCTTCCTTGGAGATATCAATGGAGTTGTGGATGTGGTCCCAGCTGACATGGTGGTGAATGCAATGCTAGTGGCCATGGTGGCTCATGCAAAGCAACCATGTGATATTGTTTACCATGTGGGTTCCTCTTTTAGAAATCCAATCACATACTCAAATCTCCAAGACTTTGGATTAAAATATTTCACGGCAAAACCATGGATAAAAAAGGATGGAACACCTGTCAAAGTTGGCAGAGTAACTGTGTTGACCGACATGGATAGCTTCCAGAGATATATGTTCATTCGCTACCTCCTTCCATTAAAGGGACTTGAGCTGGTCAATACTGCACTTTGCCAGTATTTTCGAGGAACCTATCTTGAACTCCACAGGAAGATCCAAGTTGTGATGCGGATGGTTGAGCTTTACAGACCCTACATGTTCTTCGATGGCATATTTGATGATATGAACACAGAGAAGTTGCGAATGGCAGCAAAACAAAGTGGAACAGAGACAGATTTGTTTTACTTTGATACAAAAGAAGTTAATTGGGAGGATTACTTTATGAAGACCCATCTTCCTGGCATTGTCAAGTACATTTTTAAGTGA 1473 0.4121 MEIGSVLDFLQNKTILILGATGFLAKIFLEKILRAQPDVKKIFLLLRASDAKSATYRLHNEIIAKDLFIVLKEKLGANFKSFISEKVTLVPGDISYEDLGLKDSILREEICNQTDVIVNLAATTNFDERYDIALGLNTFGVKHVMNFAKQCTKLIVLLHVSTAYVCGERGGLILEDPYHFGETLNGESGLDIDAERTIVCNKLDELREQGATEREVKIAMKNLGLSRAKVYGWPNTYVFTKAVGEMFVEKLKGNLSVVIIRPAIVTSTLKEPFPGWAEGVRTIDSLAVTYGQGKLTCFLGDINGVVDVVPADMVVNAMLVAMVAHAKQPCDIVYHVGSSFRNPITYSNLQDFGLKYFTAKPWIKKDGTPVKVGRVTVLTDMDSFQRYMFIRYLLPLKGLELVNTALCQYFRGTYLELHRKIQVVMRMVELYRPYMFFDGIFDDMNTEKLRMAAKQSGTETDLFYFDTKEVNWEDYFMKTHLPGIVKYIFK 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00631 490 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 490 IPR026055 GO:0080019
Spst5g00631 490 Pfam Male sterility protein 391 490 IPR033640 -
Spst5g00631 490 CDD FAR_C 390 489 IPR033640 -
Spst5g00631 490 Pfam Male sterility protein 19 318 IPR013120 -
Spst5g00631 490 CDD FAR-N_SDR_e 13 361 - -
Spst5g00631 490 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 338 IPR036291 -
Spst5g00631 490 Gene3D - 8 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00631 Spst-Chr5 5388735 5394276 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00631 110 489 Acyl Lipid Metabolism Gene Families AT4G33790 58.684 3.34e-173 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00631 K13356 - gmx:100805776 897.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00631 5 5388735 5394276 Spst5g00631 5 5388735 5394276 ECH
Spst5g00631 5 5388735 5394276 Spst11g01211 11 36405611 36410963 PCT