Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01211 ATGGAGTTGGGAAGCATACTCCATTTCCTTCAGGACAAGACCATTTTGATCACTGGAGCCACTGGCTTTCTTGCCAAAGTTTTGTTGGAGAAGATATTGAGGGTCCAACCAAATGTTAAGAAGATCTACCTTCTTTTAAGAGCTGCAGATGCCAAATCTGCTACTCATCGCTTGCACAATGAGATCATAGCGAAGGATTTGTTTAGGGTACTGAAGGAAAAAGTTGGTGCAAATTTTAATTCTTTTATCTCGAAAAAGTTGACCCTGGTACCTGGTGACATATCTCGAGAAGACTTAGGATTGGAGGATACCATTCTAAAGGAAGAGATTTATGATCAAACAGATGTCATCATTAACTTAGCTGCTACAACTAACTTTGATGAAAGGTATGATATATCTTTGGGTCTAAATACCTTTGGTGTCAAGTATGTCATCAACTTCGCCAAAAAATGTACAAAACTCCAGGTTCTTGTGCATGTTTCAACAGCCTACGTATGTGGTGAGGGAGGGGAAGAAGGACTGATATTAGAGAAACCATATCATCTTGGTGATTCTCTGAATGGAGTCCCTGGATTAGACATCAATGCAGAAGAAAAAGTGGTTCATAACAAATTGACTGAACTACAACAACTGGGGGCCACAGAAAAGGAAACTAAAGAGGTTATGAAGGACTTGGGTATTAGCAGGGCAAAGTTGTATGGATGGCCAAACACATATGTATTCACCAAGGCAATGGGAGAGATGCTTGTGGAGCAACTGAAAGGAAACTTATCCGTTGTGATCATTCGTCCTACTATTGTTACCAGCACATTCAGAGAGCCTTTCCCTGGTTGGGCTGAAGGTGTAAGAACTATTGACAGTTTAGCATTAGCTTATGGGAAGGGGAAGTTGACATGCTTCCTTGGAGATCTCAAAGCAATTGTTGATGCGATACCAGCTGACATGGTGGTGAATGCAATACTTGTGGCTATGGTGGCTCATGCAAATCATCCTAGTGATGATGTTATATACCATGTTGGTTCCTCTGTTAGAAGACCAATAAGATACAGCAATCTTCAAGAGTATGGCTTAAGATATTTCACAGCAAAACCATGGATAAACAAAGATGGAAGGCCAGTTAAGGTTGGCAAAGTTACAGTACTGAGCAACATGGAGAGCTTCAGAAGATATATGTTCATTCGCTACCTGCTTGTGCTGAAGGGACTTGAGCTGGCCAATACTGCATTTTGCCAGTATTTCCGAGGCACATATCTTGATCTCAGTAGGAAGATCCAGATTGTGATGCGGTTGGTGGACCTTTACAAGCCCTACTTGTTCTTCAGAGCTGCATTTGATGATATGAACACAGAGAAGTTGCGAATGGCAGCAAGACAAGGAGGGGTGGAGACAGATTTGTTTTACTTTGATCCCGAACTGATTGATTGGGGTGATTACTTTTTGAACATCCACCTTCCTGGTGTGGTGAAGTACATTTTCAAGTGA 1482 0.4157 MELGSILHFLQDKTILITGATGFLAKVLLEKILRVQPNVKKIYLLLRAADAKSATHRLHNEIIAKDLFRVLKEKVGANFNSFISKKLTLVPGDISREDLGLEDTILKEEIYDQTDVIINLAATTNFDERYDISLGLNTFGVKYVINFAKKCTKLQVLVHVSTAYVCGEGGEEGLILEKPYHLGDSLNGVPGLDINAEEKVVHNKLTELQQLGATEKETKEVMKDLGISRAKLYGWPNTYVFTKAMGEMLVEQLKGNLSVVIIRPTIVTSTFREPFPGWAEGVRTIDSLALAYGKGKLTCFLGDLKAIVDAIPADMVVNAILVAMVAHANHPSDDVIYHVGSSVRRPIRYSNLQEYGLRYFTAKPWINKDGRPVKVGKVTVLSNMESFRRYMFIRYLLVLKGLELANTAFCQYFRGTYLDLSRKIQIVMRLVDLYKPYLFFRAAFDDMNTEKLRMAARQGGVETDLFYFDPELIDWGDYFLNIHLPGVVKYIFK 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01211 493 CDD FAR-N_SDR_e 13 364 - -
Spst11g01211 493 Pfam Male sterility protein 17 320 IPR013120 -
Spst11g01211 493 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 339 IPR036291 -
Spst11g01211 493 Gene3D - 8 376 - -
Spst11g01211 493 Pfam Male sterility protein 395 493 IPR033640 -
Spst11g01211 493 CDD FAR_C 393 492 IPR033640 -
Spst11g01211 493 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 493 IPR026055 GO:0080019
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01211 Spst-Chr11 36405611 36410963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01211 113 492 Acyl Lipid Metabolism Gene Families AT4G33790 60.000 6.47e-177 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01211 K13356 - gmx:100798338 916.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00631 5 5388735 5394276 Spst11g01211 11 36405611 36410963 PCT