Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00619 ATGTTGAAGGAGTTGTACGAGAATTTGTTTGAAAATAAAGAGTCATGGGGTTCTTACAATGAACAGATCAAGAAGGTGAGGCAAATTGTGAATATATATTTGGCTGCTGGGAACAAGCTTTGGGGTATGCTAGCAATGGGGGAATTTAAACACTTTGTAATTGTTAAGTTCAAGGAAGGTGTGGCAGTTGATGAGCTCACAAAAGGGATGGAGAAGTTGGTCTCAGAGATTGATGCTGTCAAGTCCTTTGAATGGGGACAGGACATTGAAAGCCTAGATGTGTTGAGACAAGGTTTCACTCATGCCTTCCTAATGACATTCAACAAGAAAGAAGACTTTGTGGCCTTTCAAAGTCACCCAAATCATGTTGAGTTCTCCACAAAATTTTCAGCAGCTATTGAGAACATTGTGCTGCTGGATTTCCCATCTACTCTTGTCAAGGCCCCAGCATGA 453 0.4128 MLKELYENLFENKESWGSYNEQIKKVRQIVNIYLAAGNKLWGMLAMGEFKHFVIVKFKEGVAVDELTKGMEKLVSEIDAVKSFEWGQDIESLDVLRQGFTHAFLMTFNKKEDFVAFQSHPNHVEFSTKFSAAIENIVLLDFPSTLVKAPA 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00619 150 Gene3D - 45 150 - -
Spst5g00619 150 SUPERFAMILY Dimeric alpha+beta barrel 46 143 IPR011008 -
Spst5g00619 150 PANTHER - 46 144 IPR044662 -
Spst5g00619 150 SMART Dabb_2 49 143 IPR013097 -
Spst5g00619 150 Pfam Stress responsive A/B Barrel Domain 50 142 IPR013097 -
Spst5g00619 150 ProSiteProfiles Stress-response A/B barrel domain profile. 49 141 IPR013097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00619 Spst-Chr5 5304988 5310041 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00619 - - gmx:100500080 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00619 5 5304988 5310041 Spst5g00619 5 5304988 5310041 ECH
Spst5g00619 5 5304988 5310041 Spst11g01229 11 36680631 36681217 PCT