Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01229 ATGGGCTCTTTCAATCACTATGTGCTTGTTAAGTTCAAGGATGGAGTTGCAGTTGAAGAACTCATTCAAGGGTTGGAGAAGATGGTATCTGGGATTGACCAAGTCAAATCCTTTGAATGGGGAAAGGACATTGAAAGCCATGATATGCTAAGACAAGGTTTCACTCATGCTTTCTTGATGACATTCAATGGGAAAGAGGAGTTCAACGCATTTCAGACTCATCCAAATCATGTTGAGTTCTCGGGAGTGTTTTCACCTGCTATTGAGAAGATTGTGGTGCTGGATTTTCCATCTAACCTTGTCAAAGCACCAGCATGA 318 0.4182 MGSFNHYVLVKFKDGVAVEELIQGLEKMVSGIDQVKSFEWGKDIESHDMLRQGFTHAFLMTFNGKEEFNAFQTHPNHVEFSGVFSPAIEKIVVLDFPSNLVKAPA 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01229 105 PANTHER - 3 99 IPR044662 -
Spst11g01229 105 SMART Dabb_2 4 98 IPR013097 -
Spst11g01229 105 ProSiteProfiles Stress-response A/B barrel domain profile. 4 96 IPR013097 -
Spst11g01229 105 SUPERFAMILY Dimeric alpha+beta barrel 2 98 IPR011008 -
Spst11g01229 105 Gene3D - 2 105 - -
Spst11g01229 105 Pfam Stress responsive A/B Barrel Domain 5 97 IPR013097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01229 Spst-Chr11 36680631 36681217 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01229 - - gmx:100306003 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00619 5 5304988 5310041 Spst11g01229 11 36680631 36681217 PCT