Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00616 ATGAATATGTCAGATATAATATCTTGTTTCAATGAGAATGCAGTGAATGTGTCACACTCTTCGTGTTCTAGCTACTCAAACAACGCGTGCATATCTCCCAGTTTTACACCTTCAACACAAAACTCAGTTTCTTCTGTCTACAAAACCACCCTCTCCAACCAAAAGCAGATTCTCATCACAGTCACGTGGTGCAAGACCCACTCCAACCAAGGACTCACCATAACCTTCGGGGAAGAGAACCCTTTGGCACCATCTTTCAGACTCAACACAAATTCACGGTTTTTCAGGAAAAAGAAAGGAAGCAAGGTCCTAGAATCGGAAGACTCTAAGGTTGAAGTCTTCTGGGATCTCTCCAGGGCCAAGTACAACACTGGTCCGGAACCTGTTGAAGGATTTTATGTGGCGATTCTAGTTGATGCAGAAATAGGTCTCGTTCTGGGGGAAGATGATGCGGTGAAGAAGTTCAAAACGAGAACCCTTTTGGCCAAAGTGTCGCTGTTGTCACGGCGCGAACATTGCTCTGGCAACGCGGTTTACGCCACCAAGGCTCAGTTCTGTGACACTGGAACTTGGCATGACATTTTGATCCGATGCAGTGGGGAGCATGAGGGTCTCAAGGCTCCTGTTTTGTCCGTTTGCATTGACAAGAAAACGGTGATCCGTGTGAAGAGGCTGCAGTGGAATTTCAGGGGCAACCAAACGATTTTCGTTGATGGGTTGCTGGTGGATTTGCTTTGGGATGTTCATAACTGGTTTTTCAACCCTGCTTCTGGGTATGCAGTGTTCATGTTCAGGACCAGAAGTGGCTTGGATAGCAGATTGTGGTTAGAAGAAAAGATTGCACAGAAAGATAAAGATAGAGTTGAATTCTCCTTGTTGATCTACGCATGTAAAAGCACATGA 903 0.4551 MNMSDIISCFNENAVNVSHSSCSSYSNNACISPSFTPSTQNSVSSVYKTTLSNQKQILITVTWCKTHSNQGLTITFGEENPLAPSFRLNTNSRFFRKKKGSKVLESEDSKVEVFWDLSRAKYNTGPEPVEGFYVAILVDAEIGLVLGEDDAVKKFKTRTLLAKVSLLSRREHCSGNAVYATKAQFCDTGTWHDILIRCSGEHEGLKAPVLSVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHNWFFNPASGYAVFMFRTRSGLDSRLWLEEKIAQKDKDRVEFSLLIYACKST 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00616 300 PANTHER EXPRESSED PROTEIN 6 298 IPR008586 -
Spst5g00616 300 Pfam Plant protein of unknown function (DUF868) 38 298 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00616 Spst-Chr5 5282076 5282978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00616 3 299 EF-hand Containing Proteins AT5G28150 39.274 5.11e-60 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00616 - - gmx:100798692 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00616 5 5282076 5282978 Spst5g00616 5 5282076 5282978 ECH
Spst5g00616 5 5282076 5282978 Spst11g01232 11 36693875 36695062 PCT