Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g01232 ATGCCATGCCAAGTCTTCTTCCTTTCAGTTTCCCCCTTTCACAAACCCAATACACATGAAAATGCAACCATAACCTCCATTTTCTCAGACCTCACAATTTCTCCAAATCCTTCAGATCTTTGTATGAGAACTATATCCCACATCGATCAAATAAAGACAAGAACATCTATATATAAAAATAGAGAAAATAGATCGTTATCGGTTGGTGTTTTCCCTGTCCAAGCCTTGAAAATGAGAGACTTAGTCTCATGCTTCAGCGATAACGCAGTGAACGTGTCTCATTCATCAATCTCGTGTTCTTCATATTCAAACAACGCTTGCATCTCTCCCTCTAACATTGCACCTTCCACCCAGAACTCAGTCTCCAGCGTCTACAAACTAGTCCTCTCCACGCTCAAGCAATTTCTTGTCACAGTTACATGGTGTCGGAGTCACTCCAACCAAGGACTCACCATAACTTTCAACGACGAGGACCCTCCACCGTTCAGACTCAACACCAATTCACGCTTCTTCAGGAAGAAAAAGGGCACAAAAATTCTCGAACCTTCTTCTTCTGACTCATCCAAGGTGGAAATCTTGTGGGATCTTTCAAACGCCAAGTATGAATCTGGTCCCGAACCCGTTCAAGGCTTTCACGTTGTGATCATCATTGACTCGGAAATCGGTCTGGTTCTCGGTGACACCGCCGAAGAAACAGTTCTTTCCAAGAGGCTCAATTTTAGAAGCAACACAAACACGAACACGGCTTTGGCTAAGGCTTCTCTTTTGTCACGTAGAGAGCATTGTTCTGGGAACACCCTTTACACCACCAAGGCTCAGTTCTGCGACACTGGTACATGGCACGATGTTATGATCAGATGCAGTGTGGAGAAGGAGAGTGAAGGGTTGCTCAAGTCACCGGTTTTATGCGTCTGCATTGATAAGAAGACTGTGATTCGTGTGAAGAGGCTGCAGTGGAATTTCAGGGGGAACCAAACCATTTTTGTTGATGGGTTGCTGGTTGATTTGCTTTGGGATGTTCATGACTGGTTCTTCAACCCTTCCTCTTCTTCTTCTGCGTATGCAGTGTTCATGTTCAGGACTAGGAGTGGCATGGATAGCAGGTTGTGGTTGGAAGAAAAGAATGCACAGAAAGATAAAGACAGGGTTGAATTCTCCTTGGTGATCTATGCCTGTAAGACTTCATAA 1188 0.4436 MPCQVFFLSVSPFHKPNTHENATITSIFSDLTISPNPSDLCMRTISHIDQIKTRTSIYKNRENRSLSVGVFPVQALKMRDLVSCFSDNAVNVSHSSISCSSYSNNACISPSNIAPSTQNSVSSVYKLVLSTLKQFLVTVTWCRSHSNQGLTITFNDEDPPPFRLNTNSRFFRKKKGTKILEPSSSDSSKVEILWDLSNAKYESGPEPVQGFHVVIIIDSEIGLVLGDTAEETVLSKRLNFRSNTNTNTALAKASLLSRREHCSGNTLYTTKAQFCDTGTWHDVMIRCSVEKESEGLLKSPVLCVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHDWFFNPSSSSSAYAVFMFRTRSGMDSRLWLEEKNAQKDKDRVEFSLVIYACKTS 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g01232 395 PANTHER EXPRESSED PROTEIN 81 393 IPR008586 -
Spst11g01232 395 Pfam Plant protein of unknown function (DUF868) 116 393 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g01232 Spst-Chr11 36693875 36695062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g01232 78 394 EF-hand Containing Proteins AT5G28150 33.750 3.19e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g01232 - - gmx:100794621 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00616 5 5282076 5282978 Spst11g01232 11 36693875 36695062 PCT